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NM_005236.3(ERCC4):c.2395C>T (p.Arg799Trp) AND Carcinoma of pancreas

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Mar 4, 2021
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001391196.2

Allele description [Variation Report for NM_005236.3(ERCC4):c.2395C>T (p.Arg799Trp)]

NM_005236.3(ERCC4):c.2395C>T (p.Arg799Trp)

Gene:
ERCC4:ERCC excision repair 4, endonuclease catalytic subunit [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16p13.12
Genomic location:
Preferred name:
NM_005236.3(ERCC4):c.2395C>T (p.Arg799Trp)
Other names:
R788W
HGVS:
  • NC_000016.10:g.13947991C>T
  • NG_011442.1:g.32835C>T
  • NM_005236.3:c.2395C>TMANE SELECT
  • NP_005227.1:p.Arg799Trp
  • NP_005227.1:p.Arg799Trp
  • LRG_463t1:c.2395C>T
  • LRG_463:g.32835C>T
  • LRG_463p1:p.Arg799Trp
  • NC_000016.9:g.14041848C>T
  • NM_005236.2:c.2395C>T
  • Q92889:p.Arg799Trp
  • p.R799W
Protein change:
R799W; ARG788TRP
Links:
UniProtKB: Q92889#VAR_005850; OMIM: 133520.0002; OMIM: 133520.0011; dbSNP: rs121913049
NCBI 1000 Genomes Browser:
rs121913049
Molecular consequence:
  • NM_005236.3:c.2395C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Carcinoma of pancreas
Synonyms:
PANCREATIC ACINAR CARCINOMA; PANCREATIC CARCINOMA; Pancreatic cancer, somatic; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0005192; MeSH: C562463; MedGen: C0235974; Orphanet: 1333

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001593122CZECANCA consortium
no assertion criteria provided
Likely pathogenic
(Mar 4, 2021)
germlinecase-control

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Slavicgermlineyes4not providednot providednot providednot providedcase-control

Details of each submission

From CZECANCA consortium, SCV001593122.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Slavic4not providednot providedcase-controlnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided4not providednot providednot provided

Last Updated: Nov 3, 2024