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NM_001321218.2(B9D1):c.473-1G>C AND Joubert syndrome 27

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Sep 26, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001291732.10

Allele description [Variation Report for NM_001321218.2(B9D1):c.473-1G>C]

NM_001321218.2(B9D1):c.473-1G>C

Gene:
B9D1:B9 domain containing 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p11.2
Genomic location:
Preferred name:
NM_001321218.2(B9D1):c.473-1G>C
HGVS:
  • NC_000017.11:g.19337749C>G
  • NG_031885.2:g.45445G>C
  • NM_001321218.2:c.473-1G>C
  • NM_001321219.2:c.405-1G>C
  • NM_001368769.2:c.113-1G>C
  • LRG_686:g.45445G>C
  • NC_000017.10:g.19241062C>G
  • NM_001321218.1:c.473-1G>C
Links:
dbSNP: rs73980009
NCBI 1000 Genomes Browser:
rs73980009
Molecular consequence:
  • NM_001321218.2:c.473-1G>C - splice acceptor variant - [Sequence Ontology: SO:0001574]
  • NM_001321219.2:c.405-1G>C - splice acceptor variant - [Sequence Ontology: SO:0001574]
  • NM_001368769.2:c.113-1G>C - splice acceptor variant - [Sequence Ontology: SO:0001574]
Observations:
1

Condition(s)

Name:
Joubert syndrome 27 (JBTS27)
Identifiers:
MONDO: MONDO:0014927; MedGen: C4310706; OMIM: 617120

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001480320New York Genome Center - CSER-NYCKidSeq
criteria provided, single submitter

(NYGC Assertion Criteria 2020)
Likely pathogenic
(Sep 26, 2019)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot provided1not providedclinical testing

Details of each submission

From New York Genome Center - CSER-NYCKidSeq, SCV001480320.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknown1not providednot provided1not providednot providednot provided

Last Updated: Nov 10, 2024