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NM_024312.5(GNPTAB):c.2862T>C (p.Pro954=) AND Mucolipidosis type II

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 24, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001276847.1

Allele description [Variation Report for NM_024312.5(GNPTAB):c.2862T>C (p.Pro954=)]

NM_024312.5(GNPTAB):c.2862T>C (p.Pro954=)

Gene:
GNPTAB:N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q23.2
Genomic location:
Preferred name:
NM_024312.5(GNPTAB):c.2862T>C (p.Pro954=)
HGVS:
  • NC_000012.12:g.101761617A>G
  • NG_021243.1:g.74251T>C
  • NM_024312.5:c.2862T>CMANE SELECT
  • NP_077288.2:p.Pro954=
  • NC_000012.11:g.102155395A>G
  • NM_024312.4:c.2862T>C
Links:
dbSNP: rs780618202
NCBI 1000 Genomes Browser:
rs780618202
Molecular consequence:
  • NM_024312.5:c.2862T>C - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Mucolipidosis type II
Synonyms:
ML II ALPHA/BETA; I cell disease; Mucolipidosis 2; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009650; MedGen: C2673377; Orphanet: 576; OMIM: 252500

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV001463431Natera, Inc.
no assertion criteria provided
Uncertain significance
(Jan 24, 2020) 		germlineclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV001463431.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024