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NM_033305.3(VPS13A):c.6018G>A (p.Leu2006=) AND Chorea-acanthocytosis

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 24, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001274095.1

Allele description [Variation Report for NM_033305.3(VPS13A):c.6018G>A (p.Leu2006=)]

NM_033305.3(VPS13A):c.6018G>A (p.Leu2006=)

Gene:
VPS13A:vacuolar protein sorting 13 homolog A [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q21.2
Genomic location:
Preferred name:
NM_033305.3(VPS13A):c.6018G>A (p.Leu2006=)
HGVS:
  • NC_000009.12:g.77332036G>A
  • NG_008931.1:g.159592G>A
  • NM_001018037.2:c.5901G>A
  • NM_001018038.3:c.6018G>A
  • NM_015186.4:c.6018G>A
  • NM_033305.3:c.6018G>AMANE SELECT
  • NP_001018047.1:p.Leu1967=
  • NP_001018048.1:p.Leu2006=
  • NP_056001.1:p.Leu2006=
  • NP_150648.2:p.Leu2006=
  • NC_000009.11:g.79946952G>A
  • NM_033305.2:c.6018G>A
Links:
dbSNP: rs201300715
NCBI 1000 Genomes Browser:
rs201300715
Molecular consequence:
  • NM_001018037.2:c.5901G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001018038.3:c.6018G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_015186.4:c.6018G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_033305.3:c.6018G>A - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Chorea-acanthocytosis
Synonyms:
Choreoacanthocytosis; Acanthocytosis with neurologic disorder; Levine-Critchley syndrome; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008695; MedGen: C0393576; Orphanet: 2388; OMIM: 200150

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001457839Natera, Inc.
no assertion criteria provided
Uncertain significance
(Jan 24, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV001457839.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Feb 20, 2024