U.S. flag

An official website of the United States government

NM_000162.5(GCK):c.1154G>A (p.Gly385Glu) AND Type 2 diabetes mellitus

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jan 1, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001262180.3

Allele description [Variation Report for NM_000162.5(GCK):c.1154G>A (p.Gly385Glu)]

NM_000162.5(GCK):c.1154G>A (p.Gly385Glu)

Gene:
GCK:glucokinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7p13
Genomic location:
Preferred name:
NM_000162.5(GCK):c.1154G>A (p.Gly385Glu)
HGVS:
  • NC_000007.14:g.44145596C>T
  • NG_008847.2:g.57575G>A
  • NM_000162.5:c.1154G>AMANE SELECT
  • NM_001354800.1:c.1154G>A
  • NM_001354801.1:c.143G>A
  • NM_001354802.1:c.14G>A
  • NM_001354803.2:c.188G>A
  • NM_033507.3:c.1157G>A
  • NM_033508.3:c.1151G>A
  • NP_000153.1:p.Gly385Glu
  • NP_001341729.1:p.Gly385Glu
  • NP_001341730.1:p.Gly48Glu
  • NP_001341731.1:p.Gly5Glu
  • NP_001341732.1:p.Gly63Glu
  • NP_277042.1:p.Gly386Glu
  • NP_277043.1:p.Gly384Glu
  • LRG_1074t1:c.1154G>A
  • LRG_1074t2:c.1157G>A
  • LRG_1074:g.57575G>A
  • LRG_1074p1:p.Gly385Glu
  • LRG_1074p2:p.Gly386Glu
  • NC_000007.13:g.44185195C>T
  • NM_033507.1:c.1157G>A
Protein change:
G384E
Links:
dbSNP: rs2096271537
NCBI 1000 Genomes Browser:
rs2096271537
Molecular consequence:
  • NM_000162.5:c.1154G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354800.1:c.1154G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354801.1:c.143G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354802.1:c.14G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354803.2:c.188G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033507.3:c.1157G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033508.3:c.1151G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Type 2 diabetes mellitus
Synonyms:
DIABETES MELLITUS, TYPE 2, PROTECTION AGAINST; Type II diabetes mellitus; Diabetes mellitus, noninsulin-dependent, late onset
Identifiers:
MONDO: MONDO:0005148; MeSH: D003924; MedGen: C0011860; OMIM: 125853; Human Phenotype Ontology: HP:0005978

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001439960Institute of Human Genetics, University of Leipzig Medical Center
criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely pathogenic
(Jan 1, 2019)
unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Institute of Human Genetics, University of Leipzig Medical Center, SCV001439960.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jul 29, 2024