NM_002834.5(PTPN11):c.317A>G (p.Asp106Gly) AND Noonan syndrome

Germline classification:: Likely pathogenic (1 submission)
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001261101.2

Allele description [Variation Report for NM_002834.5(PTPN11):c.317A>G (p.Asp106Gly)]

NM_002834.5(PTPN11):c.317A>G (p.Asp106Gly)

Gene:

PTPN11:protein tyrosine phosphatase non-receptor type 11 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

12q24.13

Genomic location:

Preferred name:

NM_002834.5(PTPN11):c.317A>G (p.Asp106Gly)

HGVS:

NC_000012.12:g.112450497A>G
NG_007459.1:g.36766A>G
NM_001330437.2:c.317A>G
NM_001374625.1:c.314A>G
NM_002834.5:c.317A>GMANE SELECT
NM_080601.3:c.317A>G
NP_001317366.1:p.Asp106Gly
NP_001361554.1:p.Asp105Gly
NP_002825.3:p.Asp106Gly
NP_542168.1:p.Asp106Gly
LRG_614t1:c.317A>G
LRG_614:g.36766A>G
NC_000012.11:g.112888301A>G
NM_002834.3:c.317A>G
NM_002834.4:c.317A>G

Protein change:

D105G

Links:

Molecular consequence:

NM_001330437.2:c.317A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001374625.1:c.314A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_002834.5:c.317A>G - missense variant - [Sequence Ontology: SO:0001583]
NM_080601.3:c.317A>G - missense variant - [Sequence Ontology: SO:0001583]

Observations:

Condition(s)

Name:: Noonan syndrome (NS)
Synonyms:: Noonan's syndrome; Pseudo-Turner syndrome
Identifiers:: MONDO: MONDO:0018997; MeSH: D009634; MedGen: C0028326; OMIM: PS163950

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001438505	Service de Génétique Moléculaire, Hôpital Robert Debré	no assertion criteria provided	Likely pathogenic	de novo	clinical testing

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001438505

Service de Génétique Moléculaire, Hôpital Robert Debré

no assertion criteria provided

Likely pathogenic

de novo

clinical testing

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	de novo	yes	not provided	1	not provided	not provided	not provided	clinical testing

Details of each submission

From Service de Génétique Moléculaire, Hôpital Robert Debré, SCV001438505.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	de novo	yes	not provided	not provided	not provided		not provided	not provided	1	not provided

Last Updated: Jun 23, 2024

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