NR_109833.1(PRNCR1):n.11999A>G AND Familial prostate cancer

Germline classification:: association (1 submission)
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001257962.1

Allele description [Variation Report for NR_109833.1(PRNCR1):n.11999A>G]

NR_109833.1(PRNCR1):n.11999A>G

Gene:

PRNCR1:prostate cancer associated non-coding RNA 1 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

8q24.21

Genomic location:

Preferred name:

NR_109833.1(PRNCR1):n.11999A>G

HGVS:

NC_000008.11:g.127091872A>G
NC_000008.10:g.128104117A>G
NR_109833.1:n.11999A>G

Links:

dbSNP: rs183373024

NCBI 1000 Genomes Browser:

rs183373024

Molecular consequence:

NR_109833.1:n.11999A>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:: Familial prostate cancer
Synonyms:: Hereditary prostate cancer
Identifiers:: MONDO: MONDO:0700275; MedGen: C2931456; OMIM: 176807

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001434775	University of Washington Center for Mendelian Genomics, University of Washington	no assertion criteria provided	association	unknown	research	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001434775

University of Washington Center for Mendelian Genomics, University of Washington

no assertion criteria provided

association

unknown

research

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	unknown	yes	not provided	not provided	not provided	not provided	not provided	research

Citations

PubMed

8q24 genetic variation and comprehensive haplotypes altering familial risk of prostate cancer.

Dupont WD, Breyer JP, Plummer WD, Chang SS, Cookson MS, Smith JA; University of Washington Center for Mendelian Genomics., Blue EE, Bamshad MJ, Smith JR.

Nat Commun. 2020 Mar 23;11(1):1523. doi: 10.1038/s41467-020-15122-1.

PubMed [citation]

PMID:: 32251286
PMCID:: PMC7089954

Details of each submission

From University of Washington Center for Mendelian Genomics, University of Washington, SCV001434775.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	research	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	unknown	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 16, 2024

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