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NM_001349338.3(FOXP1):c.1321_1324del (p.Asp441fs) AND Rare genetic intellectual disability

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001257016.2

Allele description [Variation Report for NM_001349338.3(FOXP1):c.1321_1324del (p.Asp441fs)]

NM_001349338.3(FOXP1):c.1321_1324del (p.Asp441fs)

Gene:
FOXP1:forkhead box P1 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
3p13
Genomic location:
Preferred name:
NM_001349338.3(FOXP1):c.1321_1324del (p.Asp441fs)
HGVS:
  • NC_000003.12:g.70977854_70977857del
  • NG_028243.1:g.611135_611138del
  • NM_001244808.3:c.1321_1324del
  • NM_001244810.2:c.1321_1324del
  • NM_001244812.3:c.1093_1096del
  • NM_001244813.3:c.1021_1024del
  • NM_001244814.3:c.1321_1324del
  • NM_001244815.2:c.1021_1024del
  • NM_001244816.2:c.1321_1324del
  • NM_001349337.2:c.1018_1021del
  • NM_001349338.3:c.1321_1324delMANE SELECT
  • NM_001349340.3:c.1321_1324del
  • NM_001349341.3:c.1318_1321del
  • NM_001349342.3:c.1021_1024del
  • NM_001349343.3:c.1018_1021del
  • NM_001349344.3:c.1018_1021del
  • NM_001370548.1:c.1021_1024del
  • NM_032682.6:c.1321_1324del
  • NP_001231737.1:p.Asp441fs
  • NP_001231739.1:p.Asp441fs
  • NP_001231741.1:p.Asp365fs
  • NP_001231742.1:p.Asp341fs
  • NP_001231743.1:p.Asp441fs
  • NP_001231744.2:p.Asp341fs
  • NP_001231745.1:p.Asp441fs
  • NP_001336266.2:p.Asp340fs
  • NP_001336267.1:p.Asp441fs
  • NP_001336269.1:p.Asp441fs
  • NP_001336270.1:p.Asp440fs
  • NP_001336271.1:p.Asp341fs
  • NP_001336272.1:p.Asp340fs
  • NP_001336273.1:p.Asp340fs
  • NP_001357477.1:p.Asp341fs
  • NP_116071.2:p.Asp441fs
  • NC_000003.11:g.71027003_71027006del
  • NC_000003.11:g.71027005_71027008del
  • NM_001349338.1:c.1321_1324delGACA
  • NR_146142.3:n.1837_1840del
  • NR_146143.3:n.1834_1837del
Protein change:
D340fs
Links:
Molecular consequence:
  • NM_001244808.3:c.1321_1324del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001244810.2:c.1321_1324del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001244812.3:c.1093_1096del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001244813.3:c.1021_1024del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001244814.3:c.1321_1324del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001244815.2:c.1021_1024del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001244816.2:c.1321_1324del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001349337.2:c.1018_1021del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001349338.3:c.1321_1324del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001349340.3:c.1321_1324del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001349341.3:c.1318_1321del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001349342.3:c.1021_1024del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001349343.3:c.1018_1021del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001349344.3:c.1018_1021del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001370548.1:c.1021_1024del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_032682.6:c.1321_1324del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NR_146142.3:n.1837_1840del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_146143.3:n.1834_1837del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Observations:
1

Condition(s)

Name:
Rare genetic intellectual disability
Identifiers:
MedGen: C5680527

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001433572Service de Génétique Moléculaire, Hôpital Robert Debré
no assertion criteria provided
Likely pathogenicde novoclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedde novoyesnot provided1not providednot providednot providedclinical testing

Details of each submission

From Service de Génétique Moléculaire, Hôpital Robert Debré, SCV001433572.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1de novoyesnot providednot providednot providednot providednot provided1not provided

Last Updated: Sep 29, 2024