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NM_201253.3(CRB1):c.3074G>T (p.Ser1025Ile) AND Leber congenital amaurosis 8

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001250614.1

Allele description [Variation Report for NM_201253.3(CRB1):c.3074G>T (p.Ser1025Ile)]

NM_201253.3(CRB1):c.3074G>T (p.Ser1025Ile)

Gene:
CRB1:crumbs cell polarity complex component 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q31.3
Genomic location:
Preferred name:
NM_201253.3(CRB1):c.3074G>T (p.Ser1025Ile)
HGVS:
  • NC_000001.11:g.197434937G>T
  • NG_008483.2:g.238476G>T
  • NM_001193640.2:c.2738G>T
  • NM_001257965.2:c.3002G>T
  • NM_001257966.2:c.2129-663G>T
  • NM_201253.3:c.3074G>TMANE SELECT
  • NP_001180569.1:p.Ser913Ile
  • NP_001244894.1:p.Ser1001Ile
  • NP_957705.1:p.Ser1025Ile
  • NC_000001.10:g.197404067G>T
  • NM_201253.2:c.3074G>T
  • NR_047563.2:n.3027G>T
  • NR_047564.2:n.3235G>T
  • P82279:p.Ser1025Ile
Protein change:
S1001I
Links:
UniProtKB: P82279#VAR_022972; dbSNP: rs62636274
NCBI 1000 Genomes Browser:
rs62636274
Molecular consequence:
  • NM_001257966.2:c.2129-663G>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001193640.2:c.2738G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001257965.2:c.3002G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_201253.3:c.3074G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_047563.2:n.3027G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_047564.2:n.3235G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Leber congenital amaurosis 8 (LCA8)
Identifiers:
MONDO: MONDO:0013453; MedGen: C3151202; Orphanet: 65; OMIM: 613835

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001425483Laboratory of Genetics in Ophthalmology, Institut Imagine
no assertion criteria provided
Likely pathogenicinheritedresearch

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyes2not providednot providednot providednot providedresearch

Citations

PubMed

Leber congenital amaurosis: comprehensive survey of the genetic heterogeneity, refinement of the clinical definition, and genotype-phenotype correlations as a strategy for molecular diagnosis.

Hanein S, Perrault I, Gerber S, Tanguy G, Barbet F, Ducroq D, Calvas P, Dollfus H, Hamel C, Lopponen T, Munier F, Santos L, Shalev S, Zafeiriou D, Dufier JL, Munnich A, Rozet JM, Kaplan J.

Hum Mutat. 2004 Apr;23(4):306-17.

PubMed [citation]
PMID:
15024725

Details of each submission

From Laboratory of Genetics in Ophthalmology, Institut Imagine, SCV001425483.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot provided2not providednot providednot provided

Last Updated: Apr 23, 2022