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NM_000368.5(TSC1):c.634_635del (p.Asn212fs) AND Tuberous sclerosis 1

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jun 9, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001199394.1

Allele description [Variation Report for NM_000368.5(TSC1):c.634_635del (p.Asn212fs)]

NM_000368.5(TSC1):c.634_635del (p.Asn212fs)

Gene:
TSC1:TSC complex subunit 1 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
9q34.13
Genomic location:
Preferred name:
NM_000368.5(TSC1):c.634_635del (p.Asn212fs)
HGVS:
  • NC_000009.12:g.132921849_132921850del
  • NG_012386.1:g.27786_27787del
  • NM_000368.5:c.634_635delMANE SELECT
  • NM_001162426.2:c.634_635del
  • NM_001162427.2:c.481_482del
  • NM_001362177.2:c.271_272del
  • NP_000359.1:p.Asn212fs
  • NP_001155898.1:p.Asn212fs
  • NP_001155899.1:p.Asn161fs
  • NP_001349106.1:p.Asn91fs
  • LRG_486:g.27786_27787del
  • NC_000009.11:g.135797236_135797237del
  • NM_000368.5:c.634_635delAAMANE SELECT
Protein change:
N161fs
Links:
dbSNP: rs1846577619
NCBI 1000 Genomes Browser:
rs1846577619
Molecular consequence:
  • NM_000368.5:c.634_635del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001162426.2:c.634_635del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001162427.2:c.481_482del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001362177.2:c.271_272del - frameshift variant - [Sequence Ontology: SO:0001589]
Observations:
2

Condition(s)

Name:
Tuberous sclerosis 1 (TSC1)
Identifiers:
MONDO: MONDO:0008612; MedGen: C1854465; Orphanet: 805; OMIM: 191100

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001370511Division of Genomic Medicine, Department of Advanced Medicine, Medical Research Institute, Kanazawa Medical University
no assertion criteria provided
Pathogenic
(Jun 9, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Japanesegermlineyes2not providednot providednot providednot providedclinical testing

Details of each submission

From Division of Genomic Medicine, Department of Advanced Medicine, Medical Research Institute, Kanazawa Medical University, SCV001370511.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Japanese2not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided2not providednot providednot provided

Last Updated: Nov 5, 2022