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NM_006005.3(WFS1):c.1672C>T (p.Arg558Cys) AND Diabetes mellitus

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001175325.5

Allele description [Variation Report for NM_006005.3(WFS1):c.1672C>T (p.Arg558Cys)]

NM_006005.3(WFS1):c.1672C>T (p.Arg558Cys)

Gene:
WFS1:wolframin ER transmembrane glycoprotein [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
4p16.1
Genomic location:
Preferred name:
NM_006005.3(WFS1):c.1672C>T (p.Arg558Cys)
HGVS:
  • NC_000004.12:g.6301467C>T
  • NG_011700.1:g.36618C>T
  • NM_001145853.1:c.1672C>T
  • NM_006005.3:c.1672C>TMANE SELECT
  • NP_001139325.1:p.Arg558Cys
  • NP_005996.2:p.Arg558Cys
  • LRG_1417t1:c.1672C>T
  • LRG_1417:g.36618C>T
  • LRG_1417p1:p.Arg558Cys
  • NC_000004.11:g.6303194C>T
  • O76024:p.Arg558Cys
Protein change:
R558C
Links:
UniProtKB: O76024#VAR_068343; dbSNP: rs199946797
NCBI 1000 Genomes Browser:
rs199946797
Molecular consequence:
  • NM_001145853.1:c.1672C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_006005.3:c.1672C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Diabetes mellitus
Synonyms:
Diabetes mellitus (disease)
Identifiers:
MONDO: MONDO:0005015; MedGen: C0011849; Human Phenotype Ontology: HP:0000819

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001250642Constantin Polychronakos Laboratory, The Research Institute of the McGill University Health Centre - T1DGC
no assertion criteria provided
Pathogenicunknownresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Constantin Polychronakos Laboratory, The Research Institute of the McGill University Health Centre - T1DGC, SCV001250642.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providedresearchnot provided

Description

Affected sibling is identical by descent for that region.

Description

PS1 PM2 PP3 PP4

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 26, 2024