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NM_145861.4(EDARADD):c.*1985A>G AND Hypohidrotic ectodermal dysplasia

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 12, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001100661.4

Allele description [Variation Report for NM_145861.4(EDARADD):c.*1985A>G]

NM_145861.4(EDARADD):c.*1985A>G

Gene:
EDARADD:EDAR associated via death domain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q43
Genomic location:
Preferred name:
NM_145861.4(EDARADD):c.*1985A>G
HGVS:
  • NC_000001.11:g.236484634A>G
  • NG_001115.8:g.1637A>G
  • NG_011566.1:g.95255A>G
  • NM_001422628.1:c.*1985A>G
  • NM_080738.5:c.*1985A>G
  • NM_145861.4:c.*1985A>GMANE SELECT
  • NC_000001.10:g.236647934A>G
  • NM_080738.4:c.*1985A>G
  • NM_145861.2:c.*1985A>G
Links:
dbSNP: rs774501424
NCBI 1000 Genomes Browser:
rs774501424
Molecular consequence:
  • NM_145861.4:c.*1985A>G - 3 prime UTR variant - [Sequence Ontology: SO:0001624]

Condition(s)

Name:
Hypohidrotic ectodermal dysplasia (HED)
Identifiers:
MONDO: MONDO:0016535; MedGen: C5848103; Orphanet: 238468; Human Phenotype Ontology: HP:0007607

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    Assertion and evidence details

    Submission AccessionSubmitterReview Status
    (Assertion method)
    Clinical Significance
    (Last evaluated)
    OriginMethodCitations
    SCV001257190Illumina Laboratory Services, Illumina
    criteria provided, single submitter

    (ICSL Variant Classification Criteria 13 December 2019)
    Uncertain significance
    (Jan 12, 2018)
    germlineclinical testing

    Citation Link

    Summary from all submissions

    EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
    not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

    Details of each submission

    From Illumina Laboratory Services, Illumina, SCV001257190.1

    #EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
    1not providednot providednot providednot providedclinical testingnot provided

    Description

    This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.

    #SampleMethodObservation
    OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
    1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

    Last Updated: Jun 29, 2024