ClinVar

NM_001165963.4(SCN1A):c.5691T>G (p.Asn1897Lys)

Genes:

SCN1A:sodium voltage-gated channel alpha subunit 1 [Gene - OMIM - HGNC]
LOC102724058:uncharacterized LOC102724058 [Gene]

Variant type:

single nucleotide variant

Cytogenetic location:

2q24.3

Genomic location:

• Chr2: 165991584 (on Assembly GRCh38)
• Chr2: 166848094 (on Assembly GRCh37)

Preferred name:

NM_001165963.4(SCN1A):c.5691T>G (p.Asn1897Lys)

HGVS:

• NC_000002.12:g.165991584A>C
• NG_011906.1:g.87056T>G
• NM_001165963.4:c.5691T>GMANE SELECT
• NM_001165964.3:c.5607T>G
• NM_001202435.3:c.5691T>G
• NM_001353948.2:c.5691T>G
• NM_001353949.2:c.5658T>G
• NM_001353950.2:c.5658T>G
• NM_001353951.2:c.5658T>G
• NM_001353952.2:c.5658T>G
• NM_001353954.2:c.5655T>G
• NM_001353955.2:c.5655T>G
• NM_001353957.2:c.5607T>G
• NM_001353958.2:c.5607T>G
• NM_001353960.2:c.5604T>G
• NM_001353961.2:c.3249T>G
• NM_006920.6:c.5658T>G
• NP_001159435.1:p.Asn1897Lys
• NP_001159436.1:p.Asn1869Lys
• NP_001189364.1:p.Asn1897Lys
• NP_001340877.1:p.Asn1897Lys
• NP_001340878.1:p.Asn1886Lys
• NP_001340879.1:p.Asn1886Lys
• NP_001340880.1:p.Asn1886Lys
• NP_001340881.1:p.Asn1886Lys
• NP_001340883.1:p.Asn1885Lys
• NP_001340884.1:p.Asn1885Lys
• NP_001340886.1:p.Asn1869Lys
• NP_001340887.1:p.Asn1869Lys
• NP_001340889.1:p.Asn1868Lys
• NP_001340890.1:p.Asn1083Lys
• NP_008851.3:p.Asn1886Lys
• LRG_8:g.87056T>G
• NC_000002.11:g.166848094A>C
• NM_001165963.1:c.5691T>G
• NM_001165963.2:c.5691T>G
• NR_148667.2:n.6108T>G

This HGVS expression did not pass validation

Protein change:

N1083K

Links:

dbSNP: rs1689157351

NCBI 1000 Genomes Browser:

rs1689157351

Molecular consequence:

• NM_001165963.4:c.5691T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001165964.3:c.5607T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001202435.3:c.5691T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353948.2:c.5691T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353949.2:c.5658T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353950.2:c.5658T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353951.2:c.5658T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353952.2:c.5658T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353954.2:c.5655T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353955.2:c.5655T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353957.2:c.5607T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353958.2:c.5607T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353960.2:c.5604T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_001353961.2:c.3249T>G - missense variant - [Sequence Ontology: SO:0001583]
• NM_006920.6:c.5658T>G - missense variant - [Sequence Ontology: SO:0001583]
• NR_148667.2:n.6108T>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Observations:

1