NM_206933.4(USH2A):c.3187_3188del (p.Gln1063fs) AND Retinal dystrophy

Germline classification:: Pathogenic (1 submission)
Last evaluated:: Mar 30, 2019
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001073486.2

Allele description [Variation Report for NM_206933.4(USH2A):c.3187_3188del (p.Gln1063fs)]

NM_206933.4(USH2A):c.3187_3188del (p.Gln1063fs)

Genes:

USH2A-AS1:USH2A antisense RNA 1 [Gene - HGNC]
USH2A:usherin [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

1q41

Genomic location:

Preferred name:

NM_206933.4(USH2A):c.3187_3188del (p.Gln1063fs)

Other names:

p.Gln1063Serfs*15

HGVS:

NC_000001.10:g.216380743_216380744del
NC_000001.11:g.216207402_216207403del
NG_009497.2:g.221047_221048del
NM_007123.6:c.3187_3188del
NM_206933.4:c.3187_3188delMANE SELECT
NP_009054.6:p.Gln1063fs
NP_996816.3:p.Gln1063fs
NC_000001.10:g.216380743_216380744del
NC_000001.10:g.216380743_216380744delTG
NC_000001.10:g.216380744_216380745del
NC_000001.10:g.216380744_216380745del
NG_009497.1:g.220995_220996del
NM_206933.2:c.3187_3188del
NM_206933.2:c.3187_3188delCA
NM_206933.3:c.3187_3188delCA
p.Gln1063SerfsX15

Protein change:

Q1063fs

Links:

dbSNP: rs886039450

NCBI 1000 Genomes Browser:

rs886039450

Molecular consequence:

NM_007123.6:c.3187_3188del - frameshift variant - [Sequence Ontology: SO:0001589]
NM_206933.4:c.3187_3188del - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:: Retinal dystrophy
Synonyms:: Inherited retinal dystrophy
Identifiers:: MONDO: MONDO:0019118; MeSH: D058499; MedGen: C0854723; Human Phenotype Ontology: HP:0000556

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001239029	Blueprint Genetics	criteria provided, single submitter (Blueprint Genetics Variant Classification Scheme)	Pathogenic (Mar 30, 2019)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001239029

Blueprint Genetics

criteria provided, single submitter

(Blueprint Genetics Variant Classification Scheme)

Pathogenic
(Mar 30, 2019)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Blueprint Genetics, SCV001239029.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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