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NM_024675.4(PALB2):c.1454C>T (p.Thr485Ile) AND Carcinoma of colon

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 31, 2017
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001030228.2

Allele description [Variation Report for NM_024675.4(PALB2):c.1454C>T (p.Thr485Ile)]

NM_024675.4(PALB2):c.1454C>T (p.Thr485Ile)

Gene:
PALB2:partner and localizer of BRCA2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16p12.2
Genomic location:
Preferred name:
NM_024675.4(PALB2):c.1454C>T (p.Thr485Ile)
HGVS:
  • NC_000016.10:g.23635092G>A
  • NG_007406.1:g.11266C>T
  • NM_024675.4:c.1454C>TMANE SELECT
  • NP_078951.2:p.Thr485Ile
  • NP_078951.2:p.Thr485Ile
  • LRG_308t1:c.1454C>T
  • LRG_308:g.11266C>T
  • LRG_308p1:p.Thr485Ile
  • NC_000016.9:g.23646413G>A
  • NM_024675.3:c.1454C>T
  • p.T485I
Protein change:
T485I
Links:
dbSNP: rs786202699
NCBI 1000 Genomes Browser:
rs786202699
Molecular consequence:
  • NM_024675.4:c.1454C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Carcinoma of colon (CRC)
Synonyms:
Colonic carcinoma; Colon carcinoma
Identifiers:
MONDO: MONDO:0002032; MedGen: C0699790

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001193106Leiden Open Variation Database
no assertion criteria provided
Uncertain significance
(Jan 31, 2017)
germlinecuration

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedcuration

Details of each submission

From Leiden Open Variation Database, SCV001193106.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedcurationnot provided

Description

Curators: Marc Tischkowitz, Arleen D. Auerbach. Submitter to LOVD: Melissa DeRycke.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024