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NM_003322.6(TULP1):c.1349G>A (p.Trp450Ter) AND Leber congenital amaurosis

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jun 23, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001003239.1

Allele description [Variation Report for NM_003322.6(TULP1):c.1349G>A (p.Trp450Ter)]

NM_003322.6(TULP1):c.1349G>A (p.Trp450Ter)

Gene:
TULP1:TUB like protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6p21.31
Genomic location:
Preferred name:
NM_003322.6(TULP1):c.1349G>A (p.Trp450Ter)
HGVS:
  • NC_000006.12:g.35500127C>T
  • NG_009077.1:g.17744G>A
  • NM_001289395.2:c.1190G>A
  • NM_003322.6:c.1349G>AMANE SELECT
  • NP_001276324.1:p.Trp397Ter
  • NP_003313.3:p.Trp450Ter
  • NC_000006.11:g.35467904C>T
  • NC_000006.11:g.35467904C>T
  • NM_003322.3:c.1349G>A
Protein change:
W397*
Links:
dbSNP: rs1581736099
NCBI 1000 Genomes Browser:
rs1581736099
Molecular consequence:
  • NM_001289395.2:c.1190G>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_003322.6:c.1349G>A - nonsense - [Sequence Ontology: SO:0001587]

Condition(s)

Name:
Leber congenital amaurosis (LCA)
Synonyms:
Congenital retinal blindness; Leber's amaurosis
Identifiers:
MONDO: MONDO:0018998; MeSH: D057130; MedGen: C0339527; OMIM: PS204000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001161318Sharon lab, Hadassah-Hebrew University Medical Center
no assertion criteria provided
Pathogenic
(Jun 23, 2019)
inheritedresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Sharon lab, Hadassah-Hebrew University Medical Center, SCV001161318.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024