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NM_000330.4(RS1):c.329G>A (p.Cys110Tyr) AND Retinoschisis

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jun 23, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001003219.9

Allele description [Variation Report for NM_000330.4(RS1):c.329G>A (p.Cys110Tyr)]

NM_000330.4(RS1):c.329G>A (p.Cys110Tyr)

Genes:
CDKL5:cyclin dependent kinase like 5 [Gene - OMIM - HGNC]
RS1:retinoschisin 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp22.13
Genomic location:
Preferred name:
NM_000330.4(RS1):c.329G>A (p.Cys110Tyr)
HGVS:
  • NC_000023.11:g.18644623C>T
  • NG_008475.1:g.224019C>T
  • NG_008659.3:g.37826G>A
  • NM_000330.4:c.329G>AMANE SELECT
  • NM_001037343.2:c.2714-1384C>T
  • NM_003159.3:c.2714-1384C>T
  • NP_000321.1:p.Cys110Tyr
  • NP_000321.1:p.Cys110Tyr
  • LRG_702t1:c.329G>A
  • LRG_702:g.37826G>A
  • LRG_702p1:p.Cys110Tyr
  • NC_000023.10:g.18662743C>T
  • NM_000330.3:c.329G>A
  • O15537:p.Cys110Tyr
Protein change:
C110Y
Links:
UniProtKB: O15537#VAR_008222; dbSNP: rs61752075
NCBI 1000 Genomes Browser:
rs61752075
Molecular consequence:
  • NM_001037343.2:c.2714-1384C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_003159.3:c.2714-1384C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000330.4:c.329G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Retinoschisis
Identifiers:
MONDO: MONDO:0004579; MedGen: C0152439; Human Phenotype Ontology: HP:0030502

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001161297Sharon lab, Hadassah-Hebrew University Medical Center
no assertion criteria provided
Likely pathogenic
(Jun 23, 2019)
inheritedresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Sharon lab, Hadassah-Hebrew University Medical Center, SCV001161297.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 3, 2024