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NM_201253.3(CRB1):c.3307G>A (p.Gly1103Arg) AND Leber congenital amaurosis

Germline classification:
Pathogenic (2 submissions)
Last evaluated:
Sep 16, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001002998.2

Allele description [Variation Report for NM_201253.3(CRB1):c.3307G>A (p.Gly1103Arg)]

NM_201253.3(CRB1):c.3307G>A (p.Gly1103Arg)

Gene:
CRB1:crumbs cell polarity complex component 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q31.3
Genomic location:
Preferred name:
NM_201253.3(CRB1):c.3307G>A (p.Gly1103Arg)
HGVS:
  • NC_000001.11:g.197435170G>A
  • NG_008483.2:g.238709G>A
  • NM_001193640.2:c.2971G>A
  • NM_001257965.2:c.3235G>A
  • NM_001257966.2:c.2129-430G>A
  • NM_201253.3:c.3307G>AMANE SELECT
  • NP_001180569.1:p.Gly991Arg
  • NP_001244894.1:p.Gly1079Arg
  • NP_957705.1:p.Gly1103Arg
  • NC_000001.10:g.197404300G>A
  • NM_201253.2:c.3307G>A
  • NR_047563.2:n.3260G>A
  • NR_047564.2:n.3468G>A
  • P82279:p.Gly1103Arg
Protein change:
G1079R; GLY1103ARG
Links:
UniProtKB: P82279#VAR_022974; OMIM: 604210.0011; dbSNP: rs62636275
NCBI 1000 Genomes Browser:
rs62636275
Molecular consequence:
  • NM_001257966.2:c.2129-430G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001193640.2:c.2971G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001257965.2:c.3235G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_201253.3:c.3307G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_047563.2:n.3260G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_047564.2:n.3468G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Leber congenital amaurosis (LCA)
Synonyms:
Congenital retinal blindness; Leber's amaurosis
Identifiers:
MONDO: MONDO:0018998; MeSH: D057130; MedGen: C0339527; OMIM: PS204000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001161052Sharon lab, Hadassah-Hebrew University Medical Center
no assertion criteria provided
Pathogenic
(Jun 23, 2019)
inheritedresearch

SCV001460950Natera, Inc.
no assertion criteria provided
Pathogenic
(Sep 16, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing
not providedinheritedyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Sharon lab, Hadassah-Hebrew University Medical Center, SCV001161052.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

From Natera, Inc., SCV001460950.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 7, 2024