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NM_000527.5(LDLR):c.1736A>T (p.Asp579Val) AND Hypercholesterolemia, familial, 1

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 29, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001000106.1

Allele description [Variation Report for NM_000527.5(LDLR):c.1736A>T (p.Asp579Val)]

NM_000527.5(LDLR):c.1736A>T (p.Asp579Val)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.1736A>T (p.Asp579Val)
HGVS:
  • NC_000019.10:g.11116889A>T
  • NG_009060.1:g.32509A>T
  • NM_000527.5:c.1736A>TMANE SELECT
  • NM_001195798.2:c.1736A>T
  • NM_001195799.2:c.1613A>T
  • NM_001195800.2:c.1232A>T
  • NM_001195803.2:c.1355A>T
  • NP_000518.1:p.Asp579Val
  • NP_001182727.1:p.Asp579Val
  • NP_001182728.1:p.Asp538Val
  • NP_001182729.1:p.Asp411Val
  • NP_001182732.1:p.Asp452Val
  • LRG_274t1:c.1736A>T
  • LRG_274:g.32509A>T
  • NC_000019.9:g.11227565A>T
  • NM_000527.4:c.1736A>T
Protein change:
D411V
Links:
dbSNP: rs879255003
NCBI 1000 Genomes Browser:
rs879255003
Molecular consequence:
  • NM_000527.5:c.1736A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.1736A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.1613A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195800.2:c.1232A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195803.2:c.1355A>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Hypercholesterolemia, familial, 1
Synonyms:
LDL RECEPTOR DISORDER; Hyperlipoproteinemia Type IIa; HYPER-LOW-DENSITY-LIPOPROTEINEMIA; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0007750; MedGen: C0745103; Orphanet: 391665; OMIM: 143890

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001156527Fundacion Favaloro, PRICAI
no assertion criteria provided
Pathogenic
(May 29, 2019)
unknownresearch

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedresearch

Citations

PubMed

Functional analysis of six uncharacterised mutations in LDLR gene.

Gomez A, Colombo R, Pontoglio A, Helman L, Kaeser L, Giunta G, Parolin ML, Toscanini U, Cuniberti L.

Atherosclerosis. 2019 Dec;291:44-51. doi: 10.1016/j.atherosclerosis.2019.10.013. Epub 2019 Oct 12.

PubMed [citation]
PMID:
31689621

Details of each submission

From Fundacion Favaloro, PRICAI, SCV001156527.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Aug 5, 2023