NM_018075.5(ANO10):c.989T>G (p.Leu330Arg) AND not provided

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Sep 5, 2018
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000991527.2

Allele description [Variation Report for NM_018075.5(ANO10):c.989T>G (p.Leu330Arg)]

NM_018075.5(ANO10):c.989T>G (p.Leu330Arg)

Gene:

ANO10:anoctamin 10 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

3p22.1

Genomic location:

Preferred name:

NM_018075.5(ANO10):c.989T>G (p.Leu330Arg)

HGVS:

NC_000003.12:g.43576865A>C
NG_028216.2:g.119730T>G
NM_001204831.3:c.989T>G
NM_001204832.3:c.791T>G
NM_001204833.3:c.656T>G
NM_001204834.3:c.593-2001T>G
NM_001346463.2:c.989T>G
NM_001346464.2:c.989T>G
NM_001346465.2:c.989T>G
NM_001346466.2:c.791T>G
NM_001346467.2:c.989T>G
NM_001346468.2:c.989T>G
NM_001346469.2:c.791T>G
NM_018075.5:c.989T>GMANE SELECT
NP_001191760.1:p.Leu330Arg
NP_001191761.1:p.Leu264Arg
NP_001191762.1:p.Leu219Arg
NP_001333392.1:p.Leu330Arg
NP_001333393.1:p.Leu330Arg
NP_001333394.1:p.Leu330Arg
NP_001333395.1:p.Leu264Arg
NP_001333396.1:p.Leu330Arg
NP_001333397.1:p.Leu330Arg
NP_001333398.1:p.Leu264Arg
NP_060545.3:p.Leu330Arg
NC_000003.11:g.43618357A>C
NM_018075.3:c.989T>G

Protein change:

L219R

Links:

dbSNP: rs1024962328

NCBI 1000 Genomes Browser:

rs1024962328

Molecular consequence:

NM_001204834.3:c.593-2001T>G - intron variant - [Sequence Ontology: SO:0001627]
NM_001204831.3:c.989T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001204832.3:c.791T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001204833.3:c.656T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001346463.2:c.989T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001346464.2:c.989T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001346465.2:c.989T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001346466.2:c.791T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001346467.2:c.989T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001346468.2:c.989T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001346469.2:c.791T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_018075.5:c.989T>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

Recent activity

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MAG: Armatimonadetes bacterium CSP1-3, whole genome shotgun sequencing project
MAG: Armatimonadetes bacterium CSP1-3, whole genome shotgun sequencing project
gi|952356918|gb|LDXQ00000000.1|LDXQ 000

Nucleotide
LOC106492217 [Apteryx mantelli]
LOC106492217 [Apteryx mantelli]
Gene ID:106492217

Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001143020	Athena Diagnostics	criteria provided, single submitter (Athena Diagnostics Criteria)	Uncertain significance (Sep 5, 2018)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001143020

Athena Diagnostics

criteria provided, single submitter

(Athena Diagnostics Criteria)

Uncertain significance
(Sep 5, 2018)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

A Standardized DNA Variant Scoring System for Pathogenicity Assessments in Mendelian Disorders.

Karbassi I, Maston GA, Love A, DiVincenzo C, Braastad CD, Elzinga CD, Bright AR, Previte D, Zhang K, Rowland CM, McCarthy M, Lapierre JL, Dubois F, Medeiros KA, Batish SD, Jones J, Liaquat K, Hoffman CA, Jaremko M, Wang Z, Sun W, Buller-Burckle A, et al.

Hum Mutat. 2016 Jan;37(1):127-34. doi: 10.1002/humu.22918. Epub 2015 Oct 29.

PubMed [citation]

PMID:: 26467025
PMCID:: PMC4737317

Details of each submission

From Athena Diagnostics, SCV001143020.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: May 7, 2024

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