NM_020526.5(EPHA8):c.2490G>A (p.Glu830=) AND not provided

This record was updated by the submitter. Please see the current version.

Germline classification:: Likely benign (1 submission)
Last evaluated:: Jun 16, 2018
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000925198.3

Allele description

NM_020526.5(EPHA8):c.2490G>A (p.Glu830=)

Gene:

EPHA8:EPH receptor A8 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

1p36.12

Genomic location:

Preferred name:

NM_020526.5(EPHA8):c.2490G>A (p.Glu830=)

HGVS:

NC_000001.11:g.22600762G>A
NM_020526.5:c.2490G>AMANE SELECT
NP_065387.1:p.Glu830=
NC_000001.10:g.22927255G>A
NM_020526.4:c.2490G>A

Links:

dbSNP: rs745323533

NCBI 1000 Genomes Browser:

rs745323533

Molecular consequence:

NM_020526.5:c.2490G>A - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: CN517202

Recent activity

Clear Turn Off Turn On

PREDICTED: Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1...
PREDICTED: Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1), transcript variant X17, mRNA
gi|2217357325|ref|XM_047417724.1|

Nucleotide
PREDICTED: Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1...
PREDICTED: Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1), transcript variant X24, mRNA
gi|2462604362|ref|XM_054353483.1|

Nucleotide
multiple C2 and transmembrane domain-containing protein 1 isoform X34 [Homo sapi...
multiple C2 and transmembrane domain-containing protein 1 isoform X34 [Homo sapiens]
gi|2462604384|ref|XP_054209468.1|

Protein
Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1), transcri...
Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1), transcript variant 19, mRNA
gi|1988312938|ref|NM_001393550.1|

Nucleotide
Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1), transcri...
Homo sapiens multiple C2 and transmembrane domain containing 1 (MCTP1), transcript variant 11, mRNA
gi|1988312891|ref|NM_001393542.1|

Nucleotide

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001070732	Invitae	criteria provided, single submitter (Invitae Variant Classification Sherloc (09022015))	Likely benign (Jun 16, 2018)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001070732

Invitae

criteria provided, single submitter

(Invitae Variant Classification Sherloc (09022015))

Likely benign
(Jun 16, 2018)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Sherloc: a comprehensive refinement of the ACMG-AMP variant classification criteria.

Nykamp K, Anderson M, Powers M, Garcia J, Herrera B, Ho YY, Kobayashi Y, Patil N, Thusberg J, Westbrook M; Invitae Clinical Genomics Group., Topper S.

Genet Med. 2017 Oct;19(10):1105-1117. doi: 10.1038/gim.2017.37. Epub 2017 May 11. Erratum in: Genet Med. 2020 Jan;22(1):240. doi: 10.1038/s41436-019-0624-9.

PubMed [citation]

PMID:: 28492532
PMCID:: PMC5632818

Details of each submission

From Invitae, SCV001070732.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Aug 23, 2022

ClinVar

Relating variation to medicine