NM_020247.5(COQ8A):c.1015G>A (p.Ala339Thr) AND Mitochondrial disease

Germline classification:: Likely pathogenic (1 submission)
Last evaluated:: Sep 18, 2019
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000852404.1

Allele description [Variation Report for NM_020247.5(COQ8A):c.1015G>A (p.Ala339Thr)]

NM_020247.5(COQ8A):c.1015G>A (p.Ala339Thr)

Gene:

COQ8A:coenzyme Q8A [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

1q42.13

Genomic location:

Preferred name:

NM_020247.5(COQ8A):c.1015G>A (p.Ala339Thr)

HGVS:

NC_000001.11:g.226982969G>A
NG_012825.2:g.90434G>A
NM_020247.5:c.1015G>AMANE SELECT
NP_064632.2:p.Ala339Thr
LRG_1092t1:c.1015G>A
LRG_1092:g.90434G>A
LRG_1092p1:p.Ala339Thr
NC_000001.10:g.227170670G>A
NM_020247.4:c.1015G>A

Protein change:

A339T

Links:

dbSNP: rs755933881

NCBI 1000 Genomes Browser:

rs755933881

Molecular consequence:

NM_020247.5:c.1015G>A - missense variant - [Sequence Ontology: SO:0001583]

Observations:

Condition(s)

Name:: Mitochondrial disease
Synonyms:: Mitochondrial diseases; Mitochondrial disorder
Identifiers:: MONDO: MONDO:0044970; MeSH: D028361; MedGen: C0751651; Orphanet: 68380

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Gm36387 predicted gene, 36387 [Mus musculus]
Gm36387 predicted gene, 36387 [Mus musculus]
Gene ID:102640276

Gene
Gm36387 AND (alive[prop]) (1)
Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000995087	Wellcome Centre for Mitochondrial Research, Newcastle University	criteria provided, single submitter (ACMG Guidelines, 2015)	Likely pathogenic (Sep 18, 2019)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000995087

Wellcome Centre for Mitochondrial Research, Newcastle University

criteria provided, single submitter

(ACMG Guidelines, 2015)

Likely pathogenic
(Sep 18, 2019)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	1	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]

PMID:: 25741868
PMCID:: PMC4544753

Details of each submission

From Wellcome Centre for Mitochondrial Research, Newcastle University, SCV000995087.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	1	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		1	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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