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NM_000527.5(LDLR):c.926C>A (p.Pro309His) AND Hypercholesterolemia, familial, 1

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 1, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000850044.1

Allele description [Variation Report for NM_000527.5(LDLR):c.926C>A (p.Pro309His)]

NM_000527.5(LDLR):c.926C>A (p.Pro309His)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.926C>A (p.Pro309His)
HGVS:
  • NC_000019.10:g.11107500C>A
  • NG_009060.1:g.23120C>A
  • NM_000527.5:c.926C>AMANE SELECT
  • NM_001195798.2:c.926C>A
  • NM_001195799.2:c.803C>A
  • NM_001195800.2:c.422C>A
  • NM_001195803.2:c.545C>A
  • NP_000518.1:p.Pro309His
  • NP_000518.1:p.Pro309His
  • NP_001182727.1:p.Pro309His
  • NP_001182728.1:p.Pro268His
  • NP_001182729.1:p.Pro141His
  • NP_001182732.1:p.Pro182His
  • LRG_274t1:c.926C>A
  • LRG_274:g.23120C>A
  • LRG_274p1:p.Pro309His
  • NC_000019.9:g.11218176C>A
  • NM_000527.4:c.926C>A
Protein change:
P141H
Links:
dbSNP: rs1600715567
NCBI 1000 Genomes Browser:
rs1600715567
Molecular consequence:
  • NM_000527.5:c.926C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.926C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.803C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195800.2:c.422C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195803.2:c.545C>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Hypercholesterolemia, familial, 1
Synonyms:
LDL RECEPTOR DISORDER; Hyperlipoproteinemia Type IIa; HYPER-LOW-DENSITY-LIPOPROTEINEMIA; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0007750; MedGen: C0745103; Orphanet: 391665; OMIM: 143890

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000992183Department of Genetics of Metabolic Diseases, Institute of Medical & Molecular Genetics, Hospital Universitario Hospital La Paz
no assertion criteria provided
Pathogenic
(Jan 1, 2019)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Caucasiangermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Functional analysis of new variants at the low-density lipoprotein receptor associated with familial hypercholesterolemia.

Rodríguez-Jiménez C, Pernía O, Mostaza J, Rodríguez-Antolín C, de Dios García-Díaz J, Alonso-Cerezo C, García-Polo I, Blanco A, Lahoz C, Arrieta F, Beltrán L, Díaz de Bustamante A, Garzón-Lorenzo L, Álvarez-Sala LA, Asenjo Á, Ibáñez de Cáceres I, Rodríguez-Nóvoa S.

Hum Mutat. 2019 Aug;40(8):1181-1190. doi: 10.1002/humu.23801. Epub 2019 Jun 18.

PubMed [citation]
PMID:
31106925

Details of each submission

From Department of Genetics of Metabolic Diseases, Institute of Medical & Molecular Genetics, Hospital Universitario Hospital La Paz, SCV000992183.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Caucasian1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Aug 5, 2023