U.S. flag

An official website of the United States government

NM_177550.5(SLC13A5):c.1438-82A>G AND not provided

Germline classification:
Benign (1 submission)
Last evaluated:
Jun 14, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000833298.1

Allele description [Variation Report for NM_177550.5(SLC13A5):c.1438-82A>G]

NM_177550.5(SLC13A5):c.1438-82A>G

Gene:
SLC13A5:solute carrier family 13 member 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p13.1
Genomic location:
Preferred name:
NM_177550.5(SLC13A5):c.1438-82A>G
HGVS:
  • NC_000017.11:g.6687748T>C
  • NG_034220.1:g.30674A>G
  • NM_001143838.3:c.1438-1410A>G
  • NM_001284509.2:c.1387-82A>G
  • NM_001284510.2:c.1309-82A>G
  • NM_177550.5:c.1438-82A>GMANE SELECT
  • LRG_1020t1:c.1438-82A>G
  • LRG_1020:g.30674A>G
  • NC_000017.10:g.6591067T>C
  • NM_177550.4:c.1438-82A>G
Links:
dbSNP: rs16956138
NCBI 1000 Genomes Browser:
rs16956138
Molecular consequence:
  • NM_001143838.3:c.1438-1410A>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001284509.2:c.1387-82A>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001284510.2:c.1309-82A>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_177550.5:c.1438-82A>G - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

Recent activity

  • Malassezia
    Malassezia
    A mitosporic fungal genus that causes a variety of skin disorders. Malassezia furfur (Pityrosporum orbiculare) causes TINEA VERSICOLOR.<br/>
    MeSH

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000975061GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Benign
(Jun 14, 2018)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000975061.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 24, 2023