NM_006736.6(DNAJB2):c.175+228A>G AND not provided

This record was updated by the submitter. Please see the current version.

Germline classification:: Likely benign (1 submission)
Last evaluated:: Jun 16, 2018
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000831790.1

Allele description

NM_006736.6(DNAJB2):c.175+228A>G

Gene:

DNAJB2:DnaJ heat shock protein family (Hsp40) member B2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

2q35

Genomic location:

Preferred name:

NM_006736.6(DNAJB2):c.175+228A>G

HGVS:

NC_000002.12:g.219280915A>G
NG_029553.1:g.6598A>G
NM_001039550.2:c.175+228A>G
NM_006736.6:c.175+228A>GMANE SELECT
NC_000002.11:g.220145637A>G
NM_001039550.1:c.175+228A>G

Links:

dbSNP: rs115665065

NCBI 1000 Genomes Browser:

rs115665065

Molecular consequence:

NM_001039550.2:c.175+228A>G - intron variant - [Sequence Ontology: SO:0001627]
NM_006736.6:c.175+228A>G - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: CN517202

Recent activity

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LOC129929121 [Homo sapiens]
LOC129929121 [Homo sapiens]
Gene ID:129929121

Gene
Sema6d sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphor...
Sema6d sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Mus musculus]
Gene ID:214968

Gene
Eid1 EP300 interacting inhibitor of differentiation 1 [Mus musculus]
Eid1 EP300 interacting inhibitor of differentiation 1 [Mus musculus]
Gene ID:58521

Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000973543	GeneDx	criteria provided, single submitter (GeneDx Variant Classification (06012015))	Likely benign (Jun 16, 2018)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000973543

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification (06012015))

Likely benign
(Jun 16, 2018)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV000973543.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 23, 2022

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