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NM_058179.4(PSAT1):c.328A>C (p.Lys110Gln) AND High myopia

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Dec 17, 2018
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000785711.2

Allele description [Variation Report for NM_058179.4(PSAT1):c.328A>C (p.Lys110Gln)]

NM_058179.4(PSAT1):c.328A>C (p.Lys110Gln)

Gene:
PSAT1:phosphoserine aminotransferase 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q21.2
Genomic location:
Preferred name:
NM_058179.4(PSAT1):c.328A>C (p.Lys110Gln)
HGVS:
  • NC_000009.12:g.78304871A>C
  • NG_012165.1:g.12729A>C
  • NM_021154.5:c.328A>C
  • NM_058179.4:c.328A>CMANE SELECT
  • NP_066977.1:p.Lys110Gln
  • NP_478059.1:p.Lys110Gln
  • NC_000009.11:g.80919787A>C
  • NM_058179.3:c.328A>C
Protein change:
K110Q
Links:
dbSNP: rs753331548
NCBI 1000 Genomes Browser:
rs753331548
Molecular consequence:
  • NM_021154.5:c.328A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_058179.4:c.328A>C - missense variant - [Sequence Ontology: SO:0001583]
Functional consequence:
  • functionally_normal [Sequence Ontology: SO:0002219] - Comment(s)
  • mutation affecting coding sequence [Sequence Ontology: SO:1000054] - Comment(s)

Condition(s)

Name:
High myopia
Synonyms:
Severe Myopia
Identifiers:
MedGen: C0271183; Human Phenotype Ontology: HP:0011003

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000891463Institute of Human Genetics, Polish Academy of Sciences
no assertion criteria provided
Uncertain significance
(Dec 17, 2018)
unknownresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Institute of Human Genetics, Polish Academy of Sciences, SCV000891463.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024