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NM_000546.6(TP53):c.772G>A (p.Glu258Lys) AND Ovarian neoplasm

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Dec 1, 2018
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000785291.4

Allele description [Variation Report for NM_000546.6(TP53):c.772G>A (p.Glu258Lys)]

NM_000546.6(TP53):c.772G>A (p.Glu258Lys)

Gene:
TP53:tumor protein p53 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p13.1
Genomic location:
Preferred name:
NM_000546.6(TP53):c.772G>A (p.Glu258Lys)
Other names:
p.E258K:GAA>AAA
HGVS:
  • NC_000017.11:g.7674191C>T
  • NG_017013.2:g.18360G>A
  • NM_000546.6:c.772G>AMANE SELECT
  • NM_001126112.3:c.772G>A
  • NM_001126113.3:c.772G>A
  • NM_001126114.3:c.772G>A
  • NM_001126115.2:c.376G>A
  • NM_001126116.2:c.376G>A
  • NM_001126117.2:c.376G>A
  • NM_001126118.2:c.655G>A
  • NM_001276695.3:c.655G>A
  • NM_001276696.3:c.655G>A
  • NM_001276697.3:c.295G>A
  • NM_001276698.3:c.295G>A
  • NM_001276699.3:c.295G>A
  • NM_001276760.3:c.655G>A
  • NM_001276761.3:c.655G>A
  • NP_000537.3:p.Glu258Lys
  • NP_000537.3:p.Glu258Lys
  • NP_001119584.1:p.Glu258Lys
  • NP_001119585.1:p.Glu258Lys
  • NP_001119586.1:p.Glu258Lys
  • NP_001119587.1:p.Glu126Lys
  • NP_001119588.1:p.Glu126Lys
  • NP_001119589.1:p.Glu126Lys
  • NP_001119590.1:p.Glu219Lys
  • NP_001263624.1:p.Glu219Lys
  • NP_001263625.1:p.Glu219Lys
  • NP_001263626.1:p.Glu99Lys
  • NP_001263627.1:p.Glu99Lys
  • NP_001263628.1:p.Glu99Lys
  • NP_001263689.1:p.Glu219Lys
  • NP_001263690.1:p.Glu219Lys
  • LRG_321t1:c.772G>A
  • LRG_321:g.18360G>A
  • LRG_321p1:p.Glu258Lys
  • NC_000017.10:g.7577509C>T
  • NM_000546.4:c.772G>A
  • NM_000546.5:c.772G>A
  • P04637:p.Glu258Lys
Protein change:
E126K; GLU258LYS
Links:
UniProtKB: P04637#VAR_005991; OMIM: 191170.0002; dbSNP: rs121912652
NCBI 1000 Genomes Browser:
rs121912652
Molecular consequence:
  • NM_000546.6:c.772G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126112.3:c.772G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126113.3:c.772G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126114.3:c.772G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126115.2:c.376G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126116.2:c.376G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126117.2:c.376G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001126118.2:c.655G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276695.3:c.655G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276696.3:c.655G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276697.3:c.295G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276698.3:c.295G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276699.3:c.295G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276760.3:c.655G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001276761.3:c.655G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Ovarian neoplasm
Synonyms:
Neoplasm of ovary; Ovarian tumor; Ovarian Neoplasms
Identifiers:
MONDO: MONDO:0021068; MeSH: D010051; MedGen: C0919267; Human Phenotype Ontology: HP:0100615

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000923859German Consortium for Hereditary Breast and Ovarian Cancer, University Hospital Cologne
no assertion criteria provided
Likely pathogenic
(Dec 1, 2018)
somaticresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedsomaticyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From German Consortium for Hereditary Breast and Ovarian Cancer, University Hospital Cologne, SCV000923859.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1somaticyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024