U.S. flag

An official website of the United States government

NM_153766.3(KCNJ1):c.155C>T (p.Thr52Met) AND Bartter disease type 2

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Sep 5, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000778314.6

Allele description [Variation Report for NM_153766.3(KCNJ1):c.155C>T (p.Thr52Met)]

NM_153766.3(KCNJ1):c.155C>T (p.Thr52Met)

Gene:
KCNJ1:potassium inwardly rectifying channel subfamily J member 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q24.3
Genomic location:
Preferred name:
NM_153766.3(KCNJ1):c.155C>T (p.Thr52Met)
HGVS:
  • NC_000011.10:g.128840089G>A
  • NG_009379.1:g.32285C>T
  • NM_000220.6:c.212C>T
  • NM_153764.3:c.155C>T
  • NM_153765.3:c.206C>T
  • NM_153766.3:c.155C>TMANE SELECT
  • NM_153767.4:c.155C>T
  • NP_000211.1:p.Thr71Met
  • NP_722448.1:p.Thr52Met
  • NP_722449.3:p.Thr69Met
  • NP_722450.1:p.Thr52Met
  • NP_722451.1:p.Thr52Met
  • NC_000011.9:g.128709984G>A
  • NM_000220.4:c.212C>T
Protein change:
T52M
Links:
dbSNP: rs373367600
NCBI 1000 Genomes Browser:
rs373367600
Molecular consequence:
  • NM_000220.6:c.212C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_153764.3:c.155C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_153765.3:c.206C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_153766.3:c.155C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_153767.4:c.155C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Bartter disease type 2
Synonyms:
HYPOKALEMIC ALKALOSIS WITH HYPERCALCIURIA 2, ANTENATAL; Hyperprostaglandin E syndrome 2; Bartter syndrome, type 2, antenatal
Identifiers:
MONDO: MONDO:0009424; MedGen: C1855849; Orphanet: 112; OMIM: 241200

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000914497Illumina Laboratory Services, Illumina
criteria provided, single submitter

(ICSLVariantClassificationCriteria RUGD 01 April 2020)
Likely pathogenic
(Sep 5, 2024)
unknownclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Illumina Laboratory Services, Illumina, SCV000914497.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 20, 2024