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NM_001377265.1(MAPT):c.2013T>G (p.Asn671Lys) AND multiple conditions

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Oct 31, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000763404.4

Allele description [Variation Report for NM_001377265.1(MAPT):c.2013T>G (p.Asn671Lys)]

NM_001377265.1(MAPT):c.2013T>G (p.Asn671Lys)

Gene:
MAPT:microtubule associated protein tau [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17q21.31
Genomic location:
Preferred name:
NM_001377265.1(MAPT):c.2013T>G (p.Asn671Lys)
HGVS:
  • NC_000017.11:g.46010324T>G
  • NG_007398.2:g.120862T>G
  • NM_001123066.4:c.1842T>G
  • NM_001123067.4:c.750T>G
  • NM_001203251.2:c.736-3919T>G
  • NM_001203252.2:c.823-3919T>G
  • NM_001377265.1:c.2013T>GMANE SELECT
  • NM_001377266.1:c.1801-3919T>G
  • NM_001377267.1:c.736-3919T>G
  • NM_001377268.1:c.649-3919T>G
  • NM_005910.6:c.837T>G
  • NM_016834.5:c.663T>G
  • NM_016835.5:c.1788T>G
  • NM_016841.5:c.649-3919T>G
  • NP_001116538.2:p.Asn614Lys
  • NP_001116539.1:p.Asn250Lys
  • NP_001364194.1:p.Asn671Lys
  • NP_005901.2:p.Asn279Lys
  • NP_005901.2:p.Asn279Lys
  • NP_058518.1:p.Asn221Lys
  • NP_058519.3:p.Asn596Lys
  • LRG_660t1:c.1788T>G
  • LRG_660t2:c.2013T>G
  • LRG_660:g.120862T>G
  • LRG_660p1:p.Asn596Lys
  • LRG_660p2:p.Asn671Lys
  • NC_000017.10:g.44087690T>G
  • NG_007398.1:g.120904T>G
  • NM_005910.5:c.837T>G
  • P10636:p.Asn596Lys
Protein change:
N221K; ASN279LYS
Links:
UniProtKB: P10636#VAR_010346; OMIM: 157140.0009; dbSNP: rs63750756
NCBI 1000 Genomes Browser:
rs63750756
Molecular consequence:
  • NM_001203251.2:c.736-3919T>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001203252.2:c.823-3919T>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001377266.1:c.1801-3919T>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001377267.1:c.736-3919T>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001377268.1:c.649-3919T>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_016841.5:c.649-3919T>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001123066.4:c.1842T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001123067.4:c.750T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001377265.1:c.2013T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005910.6:c.837T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_016834.5:c.663T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_016835.5:c.1788T>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Frontotemporal dementia (FTD1)
Synonyms:
FRONTOTEMPORAL LOBE DEMENTIA; WILHELMSEN-LYNCH DISEASE; Dementia, frontotemporal, with parkinsonism; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0017276; MedGen: C0338451; Orphanet: 282; OMIM: 600274; Human Phenotype Ontology: HP:0002145
Name:
Parkinson disease, late-onset (PD)
Synonyms:
Parkinson's disease; PARKINSON DISEASE, LATE-ONSET, SUSCEPTIBILITY TO; Susceptibility to Parkinson's Disease; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008199; MedGen: C3160718; OMIM: 168600
Name:
Progressive supranuclear palsy-parkinsonism syndrome
Synonyms:
Parkinson-dementia syndrome; Supranuclear palsy, progressive, 1, atypical; Progressive supranuclear palsy atypical; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009839; MedGen: C1850077; Orphanet: 240085; Orphanet: 683; Orphanet: 99750; OMIM: 260540
Name:
Pick disease
Synonyms:
PICK DISEASE OF BRAIN; LOBAR ATROPHY OF BRAIN; Pick's disease; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008243; MedGen: C0236642; Orphanet: 282; OMIM: 172700
Name:
Progressive supranuclear ophthalmoplegia
Synonyms:
Familial progressive supranuclear palsy (type)
Identifiers:
MedGen: C4551862

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000894131Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Pathogenic
(Oct 31, 2018) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753
PMC

Standards and Guidelines for the Interpretation of Sequence Variants: A Joint Consensus Recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL.

Genetics in medicine : official journal of the American College of Medical Genetics. 2015 Mar 5; 17(5): 405-424

PMC [article]
PMCID:
PMC4544753
PMID:
25741868
DOI:
10.1038/gim.2015.30

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV000894131.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 20, 2024