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NM_001127898.4(CLCN5):c.1396G>C (p.Asp466His) AND Dent disease type 1

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000714293.1

Allele description [Variation Report for NM_001127898.4(CLCN5):c.1396G>C (p.Asp466His)]

NM_001127898.4(CLCN5):c.1396G>C (p.Asp466His)

Gene:
CLCN5:chloride voltage-gated channel 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp11.23
Genomic location:
Preferred name:
NM_001127898.4(CLCN5):c.1396G>C (p.Asp466His)
HGVS:
  • NC_000023.11:g.50086709G>C
  • NG_007159.3:g.169094G>C
  • NM_000084.5:c.1186G>C
  • NM_001127898.4:c.1396G>CMANE SELECT
  • NM_001127899.4:c.1396G>C
  • NM_001282163.2:c.1246G>C
  • NP_000075.1:p.Asp396His
  • NP_001121370.1:p.Asp466His
  • NP_001121371.1:p.Asp466His
  • NP_001269092.1:p.Asp416His
  • NC_000023.10:g.49851366G>C
  • NM_000084.4:c.1186G>C
Protein change:
D396H
Links:
dbSNP: rs1569540369
NCBI 1000 Genomes Browser:
rs1569540369
Molecular consequence:
  • NM_000084.5:c.1186G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127898.4:c.1396G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127899.4:c.1396G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282163.2:c.1246G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Dent disease type 1
Synonyms:
NEPHROLITHIASIS, HYPERCALCIURIC, X-LINKED; Nephrolithiasis, hypercalciuria X-linked; Urolithiasis, hypercalciuric X-linked; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0010225; MedGen: C1848336; Orphanet: 1652; Orphanet: 93622; OMIM: 300009

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000844920Felix Claverie-Martin Laboratory, Hospital Universitario Nuestra Senora de Candelaria
no assertion criteria provided
Pathogenicinheritedclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Felix Claverie-Martin Laboratory, Hospital Universitario Nuestra Senora de Candelaria, SCV000844920.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jul 29, 2023