NM_007294.4(BRCA1):c.117T>G (p.Cys39Trp) AND Hereditary breast ovarian cancer syndrome
- Germline classification:
- Pathogenic (1 submission)
- Last evaluated:
- Jan 30, 2019
- Review status:
- 1 star out of maximum of 4 starscriteria provided, single submitter
- Somatic classification
of clinical impact: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Somatic classification
of oncogenicity: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Record status:
- current
- Accession:
- RCV000703438.11
Allele description [Variation Report for NM_007294.4(BRCA1):c.117T>G (p.Cys39Trp)]
NM_007294.4(BRCA1):c.117T>G (p.Cys39Trp)
- Gene:
- BRCA1:BRCA1 DNA repair associated [Gene - OMIM - HGNC]
- Variant type:
- single nucleotide variant
- Cytogenetic location:
- 17q21.31
- Genomic location:
- Preferred name:
- NM_007294.4(BRCA1):c.117T>G (p.Cys39Trp)
- HGVS:
- NC_000017.11:g.43115743A>C
- NG_005905.2:g.102241T>G
- NM_001407571.1:c.-72T>G
- NM_001407581.1:c.117T>G
- NM_001407582.1:c.117T>G
- NM_001407583.1:c.117T>G
- NM_001407585.1:c.117T>G
- NM_001407587.1:c.117T>G
- NM_001407590.1:c.117T>G
- NM_001407591.1:c.117T>G
- NM_001407593.1:c.117T>G
- NM_001407594.1:c.117T>G
- NM_001407596.1:c.117T>G
- NM_001407597.1:c.117T>G
- NM_001407598.1:c.117T>G
- NM_001407602.1:c.117T>G
- NM_001407603.1:c.117T>G
- NM_001407605.1:c.117T>G
- NM_001407610.1:c.117T>G
- NM_001407611.1:c.117T>G
- NM_001407612.1:c.117T>G
- NM_001407613.1:c.117T>G
- NM_001407614.1:c.117T>G
- NM_001407615.1:c.117T>G
- NM_001407616.1:c.117T>G
- NM_001407617.1:c.117T>G
- NM_001407618.1:c.117T>G
- NM_001407619.1:c.117T>G
- NM_001407620.1:c.117T>G
- NM_001407621.1:c.117T>G
- NM_001407622.1:c.117T>G
- NM_001407623.1:c.117T>G
- NM_001407624.1:c.117T>G
- NM_001407625.1:c.117T>G
- NM_001407626.1:c.117T>G
- NM_001407627.1:c.117T>G
- NM_001407628.1:c.117T>G
- NM_001407629.1:c.117T>G
- NM_001407630.1:c.117T>G
- NM_001407631.1:c.117T>G
- NM_001407632.1:c.117T>G
- NM_001407633.1:c.117T>G
- NM_001407634.1:c.117T>G
- NM_001407635.1:c.117T>G
- NM_001407636.1:c.117T>G
- NM_001407637.1:c.117T>G
- NM_001407638.1:c.117T>G
- NM_001407639.1:c.117T>G
- NM_001407640.1:c.117T>G
- NM_001407641.1:c.117T>G
- NM_001407642.1:c.117T>G
- NM_001407644.1:c.117T>G
- NM_001407645.1:c.117T>G
- NM_001407646.1:c.117T>G
- NM_001407647.1:c.117T>G
- NM_001407648.1:c.117T>G
- NM_001407649.1:c.117T>G
- NM_001407652.1:c.117T>G
- NM_001407653.1:c.117T>G
- NM_001407654.1:c.117T>G
- NM_001407655.1:c.117T>G
- NM_001407656.1:c.117T>G
- NM_001407657.1:c.117T>G
- NM_001407658.1:c.117T>G
- NM_001407659.1:c.117T>G
- NM_001407660.1:c.117T>G
- NM_001407661.1:c.117T>G
- NM_001407662.1:c.117T>G
- NM_001407663.1:c.117T>G
- NM_001407664.1:c.117T>G
- NM_001407665.1:c.117T>G
- NM_001407666.1:c.117T>G
- NM_001407667.1:c.117T>G
- NM_001407668.1:c.117T>G
- NM_001407669.1:c.117T>G
- NM_001407670.1:c.117T>G
- NM_001407671.1:c.117T>G
- NM_001407672.1:c.117T>G
- NM_001407673.1:c.117T>G
- NM_001407674.1:c.117T>G
- NM_001407675.1:c.117T>G
- NM_001407676.1:c.117T>G
- NM_001407677.1:c.117T>G
- NM_001407678.1:c.117T>G
- NM_001407679.1:c.117T>G
- NM_001407680.1:c.117T>G
- NM_001407681.1:c.117T>G
- NM_001407682.1:c.117T>G
- NM_001407683.1:c.117T>G
- NM_001407684.1:c.117T>G
- NM_001407685.1:c.117T>G
- NM_001407686.1:c.117T>G
- NM_001407687.1:c.117T>G
- NM_001407688.1:c.117T>G
- NM_001407689.1:c.117T>G
- NM_001407690.1:c.117T>G
- NM_001407691.1:c.117T>G
- NM_001407694.1:c.-141T>G
- NM_001407695.1:c.-145T>G
- NM_001407696.1:c.-141T>G
- NM_001407697.1:c.-25T>G
- NM_001407724.1:c.-141T>G
- NM_001407725.1:c.-25T>G
- NM_001407727.1:c.-141T>G
- NM_001407728.1:c.-25T>G
- NM_001407729.1:c.-25T>G
- NM_001407730.1:c.-25T>G
- NM_001407731.1:c.-141T>G
- NM_001407733.1:c.-141T>G
- NM_001407734.1:c.-25T>G
- NM_001407735.1:c.-25T>G
- NM_001407737.1:c.-25T>G
- NM_001407739.1:c.-25T>G
- NM_001407740.1:c.-25T>G
- NM_001407741.1:c.-25T>G
- NM_001407743.1:c.-25T>G
- NM_001407745.1:c.-25T>G
- NM_001407746.1:c.-141T>G
- NM_001407748.1:c.-25T>G
- NM_001407749.1:c.-141T>G
- NM_001407752.1:c.-25T>G
- NM_001407838.1:c.-25T>G
- NM_001407839.1:c.-25T>G
- NM_001407841.1:c.-21T>G
- NM_001407842.1:c.-141T>G
- NM_001407843.1:c.-141T>G
- NM_001407844.1:c.-25T>G
- NM_001407846.1:c.-25T>G
- NM_001407847.1:c.-25T>G
- NM_001407848.1:c.-25T>G
- NM_001407850.1:c.-25T>G
- NM_001407851.1:c.-25T>G
- NM_001407853.1:c.-72T>G
- NM_001407854.1:c.117T>G
- NM_001407858.1:c.117T>G
- NM_001407859.1:c.117T>G
- NM_001407860.1:c.117T>G
- NM_001407861.1:c.117T>G
- NM_001407862.1:c.117T>G
- NM_001407863.1:c.117T>G
- NM_001407874.1:c.117T>G
- NM_001407875.1:c.117T>G
- NM_001407879.1:c.-72T>G
- NM_001407882.1:c.-72T>G
- NM_001407884.1:c.-72T>G
- NM_001407885.1:c.-72T>G
- NM_001407886.1:c.-72T>G
- NM_001407887.1:c.-72T>G
- NM_001407889.1:c.-188T>G
- NM_001407894.1:c.-72T>G
- NM_001407895.1:c.-72T>G
- NM_001407896.1:c.-72T>G
- NM_001407897.1:c.-72T>G
- NM_001407899.1:c.-72T>G
- NM_001407900.1:c.-188T>G
- NM_001407904.1:c.-72T>G
- NM_001407906.1:c.-72T>G
- NM_001407907.1:c.-72T>G
- NM_001407908.1:c.-72T>G
- NM_001407909.1:c.-72T>G
- NM_001407910.1:c.-72T>G
- NM_001407915.1:c.-72T>G
- NM_001407916.1:c.-72T>G
- NM_001407917.1:c.-72T>G
- NM_001407918.1:c.-72T>G
- NM_001407919.1:c.117T>G
- NM_001407920.1:c.-25T>G
- NM_001407921.1:c.-25T>G
- NM_001407922.1:c.-25T>G
- NM_001407923.1:c.-25T>G
- NM_001407926.1:c.-25T>G
- NM_001407927.1:c.-25T>G
- NM_001407930.1:c.-141T>G
- NM_001407933.1:c.-25T>G
- NM_001407934.1:c.-25T>G
- NM_001407935.1:c.-25T>G
- NM_001407937.1:c.117T>G
- NM_001407938.1:c.117T>G
- NM_001407939.1:c.117T>G
- NM_001407940.1:c.117T>G
- NM_001407941.1:c.117T>G
- NM_001407942.1:c.-141T>G
- NM_001407943.1:c.-25T>G
- NM_001407944.1:c.-25T>G
- NM_001407946.1:c.-72T>G
- NM_001407947.1:c.-72T>G
- NM_001407948.1:c.-72T>G
- NM_001407949.1:c.-72T>G
- NM_001407950.1:c.-72T>G
- NM_001407951.1:c.-72T>G
- NM_001407952.1:c.-72T>G
- NM_001407953.1:c.-72T>G
- NM_001407954.1:c.-72T>G
- NM_001407955.1:c.-72T>G
- NM_001407956.1:c.-72T>G
- NM_001407957.1:c.-72T>G
- NM_001407958.1:c.-72T>G
- NM_001407960.1:c.-187T>G
- NM_001407962.1:c.-187T>G
- NM_001407964.1:c.-25T>G
- NM_001407965.1:c.-303T>G
- NM_001407968.1:c.117T>G
- NM_001407969.1:c.117T>G
- NM_001407970.1:c.117T>G
- NM_001407971.1:c.117T>G
- NM_001407972.1:c.117T>G
- NM_001407973.1:c.117T>G
- NM_001407974.1:c.117T>G
- NM_001407975.1:c.117T>G
- NM_001407976.1:c.117T>G
- NM_001407977.1:c.117T>G
- NM_001407978.1:c.117T>G
- NM_001407979.1:c.117T>G
- NM_001407980.1:c.117T>G
- NM_001407981.1:c.117T>G
- NM_001407982.1:c.117T>G
- NM_001407983.1:c.117T>G
- NM_001407984.1:c.117T>G
- NM_001407985.1:c.117T>G
- NM_001407986.1:c.117T>G
- NM_001407990.1:c.117T>G
- NM_001407991.1:c.117T>G
- NM_001407992.1:c.117T>G
- NM_001407993.1:c.117T>G
- NM_001408392.1:c.117T>G
- NM_001408396.1:c.117T>G
- NM_001408397.1:c.117T>G
- NM_001408398.1:c.117T>G
- NM_001408399.1:c.117T>G
- NM_001408400.1:c.117T>G
- NM_001408401.1:c.117T>G
- NM_001408402.1:c.117T>G
- NM_001408403.1:c.117T>G
- NM_001408404.1:c.117T>G
- NM_001408406.1:c.117T>G
- NM_001408407.1:c.117T>G
- NM_001408408.1:c.117T>G
- NM_001408409.1:c.117T>G
- NM_001408410.1:c.-25T>G
- NM_001408411.1:c.117T>G
- NM_001408412.1:c.117T>G
- NM_001408413.1:c.117T>G
- NM_001408414.1:c.117T>G
- NM_001408415.1:c.117T>G
- NM_001408416.1:c.117T>G
- NM_001408418.1:c.117T>G
- NM_001408419.1:c.117T>G
- NM_001408420.1:c.117T>G
- NM_001408421.1:c.117T>G
- NM_001408422.1:c.117T>G
- NM_001408423.1:c.117T>G
- NM_001408424.1:c.117T>G
- NM_001408425.1:c.117T>G
- NM_001408426.1:c.117T>G
- NM_001408427.1:c.117T>G
- NM_001408428.1:c.117T>G
- NM_001408429.1:c.117T>G
- NM_001408430.1:c.117T>G
- NM_001408431.1:c.117T>G
- NM_001408432.1:c.117T>G
- NM_001408433.1:c.117T>G
- NM_001408434.1:c.117T>G
- NM_001408435.1:c.117T>G
- NM_001408436.1:c.117T>G
- NM_001408437.1:c.117T>G
- NM_001408438.1:c.117T>G
- NM_001408439.1:c.117T>G
- NM_001408440.1:c.117T>G
- NM_001408441.1:c.117T>G
- NM_001408442.1:c.117T>G
- NM_001408443.1:c.117T>G
- NM_001408444.1:c.117T>G
- NM_001408445.1:c.117T>G
- NM_001408446.1:c.117T>G
- NM_001408447.1:c.117T>G
- NM_001408448.1:c.117T>G
- NM_001408450.1:c.117T>G
- NM_001408452.1:c.-25T>G
- NM_001408453.1:c.-25T>G
- NM_001408455.1:c.-141T>G
- NM_001408456.1:c.-141T>G
- NM_001408458.1:c.-25T>G
- NM_001408462.1:c.-25T>G
- NM_001408463.1:c.-25T>G
- NM_001408465.1:c.-145T>G
- NM_001408466.1:c.-25T>G
- NM_001408468.1:c.-141T>G
- NM_001408469.1:c.-25T>G
- NM_001408470.1:c.-25T>G
- NM_001408472.1:c.117T>G
- NM_001408473.1:c.117T>G
- NM_001408474.1:c.117T>G
- NM_001408475.1:c.117T>G
- NM_001408476.1:c.117T>G
- NM_001408478.1:c.-72T>G
- NM_001408479.1:c.-72T>G
- NM_001408480.1:c.-72T>G
- NM_001408481.1:c.-72T>G
- NM_001408482.1:c.-72T>G
- NM_001408483.1:c.-72T>G
- NM_001408484.1:c.-72T>G
- NM_001408485.1:c.-72T>G
- NM_001408489.1:c.-72T>G
- NM_001408490.1:c.-72T>G
- NM_001408491.1:c.-72T>G
- NM_001408492.1:c.-188T>G
- NM_001408493.1:c.-72T>G
- NM_001408494.1:c.117T>G
- NM_001408495.1:c.117T>G
- NM_001408497.1:c.-25T>G
- NM_001408499.1:c.-25T>G
- NM_001408500.1:c.-25T>G
- NM_001408501.1:c.-141T>G
- NM_001408502.1:c.-72T>G
- NM_001408503.1:c.-25T>G
- NM_001408504.1:c.-25T>G
- NM_001408505.1:c.-25T>G
- NM_001408506.1:c.-72T>G
- NM_001408507.1:c.-72T>G
- NM_001408508.1:c.-72T>G
- NM_001408509.1:c.-72T>G
- NM_001408510.1:c.-187T>G
- NM_001408512.1:c.-187T>G
- NM_001408513.1:c.-72T>G
- NM_001408514.1:c.-72T>G
- NM_007294.4:c.117T>GMANE SELECT
- NM_007297.4:c.-8+8274T>G
- NM_007298.4:c.117T>G
- NM_007299.4:c.117T>G
- NM_007300.4:c.117T>G
- NM_007304.2:c.117T>G
- NP_001394510.1:p.Cys39Trp
- NP_001394511.1:p.Cys39Trp
- NP_001394512.1:p.Cys39Trp
- NP_001394514.1:p.Cys39Trp
- NP_001394516.1:p.Cys39Trp
- NP_001394519.1:p.Cys39Trp
- NP_001394520.1:p.Cys39Trp
- NP_001394522.1:p.Cys39Trp
- NP_001394523.1:p.Cys39Trp
- NP_001394525.1:p.Cys39Trp
- NP_001394526.1:p.Cys39Trp
- NP_001394527.1:p.Cys39Trp
- NP_001394531.1:p.Cys39Trp
- NP_001394532.1:p.Cys39Trp
- NP_001394534.1:p.Cys39Trp
- NP_001394539.1:p.Cys39Trp
- NP_001394540.1:p.Cys39Trp
- NP_001394541.1:p.Cys39Trp
- NP_001394542.1:p.Cys39Trp
- NP_001394543.1:p.Cys39Trp
- NP_001394544.1:p.Cys39Trp
- NP_001394545.1:p.Cys39Trp
- NP_001394546.1:p.Cys39Trp
- NP_001394547.1:p.Cys39Trp
- NP_001394548.1:p.Cys39Trp
- NP_001394549.1:p.Cys39Trp
- NP_001394550.1:p.Cys39Trp
- NP_001394551.1:p.Cys39Trp
- NP_001394552.1:p.Cys39Trp
- NP_001394553.1:p.Cys39Trp
- NP_001394554.1:p.Cys39Trp
- NP_001394555.1:p.Cys39Trp
- NP_001394556.1:p.Cys39Trp
- NP_001394557.1:p.Cys39Trp
- NP_001394558.1:p.Cys39Trp
- NP_001394559.1:p.Cys39Trp
- NP_001394560.1:p.Cys39Trp
- NP_001394561.1:p.Cys39Trp
- NP_001394562.1:p.Cys39Trp
- NP_001394563.1:p.Cys39Trp
- NP_001394564.1:p.Cys39Trp
- NP_001394565.1:p.Cys39Trp
- NP_001394566.1:p.Cys39Trp
- NP_001394567.1:p.Cys39Trp
- NP_001394568.1:p.Cys39Trp
- NP_001394569.1:p.Cys39Trp
- NP_001394570.1:p.Cys39Trp
- NP_001394571.1:p.Cys39Trp
- NP_001394573.1:p.Cys39Trp
- NP_001394574.1:p.Cys39Trp
- NP_001394575.1:p.Cys39Trp
- NP_001394576.1:p.Cys39Trp
- NP_001394577.1:p.Cys39Trp
- NP_001394578.1:p.Cys39Trp
- NP_001394581.1:p.Cys39Trp
- NP_001394582.1:p.Cys39Trp
- NP_001394583.1:p.Cys39Trp
- NP_001394584.1:p.Cys39Trp
- NP_001394585.1:p.Cys39Trp
- NP_001394586.1:p.Cys39Trp
- NP_001394587.1:p.Cys39Trp
- NP_001394588.1:p.Cys39Trp
- NP_001394589.1:p.Cys39Trp
- NP_001394590.1:p.Cys39Trp
- NP_001394591.1:p.Cys39Trp
- NP_001394592.1:p.Cys39Trp
- NP_001394593.1:p.Cys39Trp
- NP_001394594.1:p.Cys39Trp
- NP_001394595.1:p.Cys39Trp
- NP_001394596.1:p.Cys39Trp
- NP_001394597.1:p.Cys39Trp
- NP_001394598.1:p.Cys39Trp
- NP_001394599.1:p.Cys39Trp
- NP_001394600.1:p.Cys39Trp
- NP_001394601.1:p.Cys39Trp
- NP_001394602.1:p.Cys39Trp
- NP_001394603.1:p.Cys39Trp
- NP_001394604.1:p.Cys39Trp
- NP_001394605.1:p.Cys39Trp
- NP_001394606.1:p.Cys39Trp
- NP_001394607.1:p.Cys39Trp
- NP_001394608.1:p.Cys39Trp
- NP_001394609.1:p.Cys39Trp
- NP_001394610.1:p.Cys39Trp
- NP_001394611.1:p.Cys39Trp
- NP_001394612.1:p.Cys39Trp
- NP_001394613.1:p.Cys39Trp
- NP_001394614.1:p.Cys39Trp
- NP_001394615.1:p.Cys39Trp
- NP_001394616.1:p.Cys39Trp
- NP_001394617.1:p.Cys39Trp
- NP_001394618.1:p.Cys39Trp
- NP_001394619.1:p.Cys39Trp
- NP_001394620.1:p.Cys39Trp
- NP_001394783.1:p.Cys39Trp
- NP_001394787.1:p.Cys39Trp
- NP_001394788.1:p.Cys39Trp
- NP_001394789.1:p.Cys39Trp
- NP_001394790.1:p.Cys39Trp
- NP_001394791.1:p.Cys39Trp
- NP_001394792.1:p.Cys39Trp
- NP_001394803.1:p.Cys39Trp
- NP_001394804.1:p.Cys39Trp
- NP_001394848.1:p.Cys39Trp
- NP_001394866.1:p.Cys39Trp
- NP_001394867.1:p.Cys39Trp
- NP_001394868.1:p.Cys39Trp
- NP_001394869.1:p.Cys39Trp
- NP_001394870.1:p.Cys39Trp
- NP_001394897.1:p.Cys39Trp
- NP_001394898.1:p.Cys39Trp
- NP_001394899.1:p.Cys39Trp
- NP_001394900.1:p.Cys39Trp
- NP_001394901.1:p.Cys39Trp
- NP_001394902.1:p.Cys39Trp
- NP_001394903.1:p.Cys39Trp
- NP_001394904.1:p.Cys39Trp
- NP_001394905.1:p.Cys39Trp
- NP_001394906.1:p.Cys39Trp
- NP_001394907.1:p.Cys39Trp
- NP_001394908.1:p.Cys39Trp
- NP_001394909.1:p.Cys39Trp
- NP_001394910.1:p.Cys39Trp
- NP_001394911.1:p.Cys39Trp
- NP_001394912.1:p.Cys39Trp
- NP_001394913.1:p.Cys39Trp
- NP_001394914.1:p.Cys39Trp
- NP_001394915.1:p.Cys39Trp
- NP_001394919.1:p.Cys39Trp
- NP_001394920.1:p.Cys39Trp
- NP_001394921.1:p.Cys39Trp
- NP_001394922.1:p.Cys39Trp
- NP_001395321.1:p.Cys39Trp
- NP_001395325.1:p.Cys39Trp
- NP_001395326.1:p.Cys39Trp
- NP_001395327.1:p.Cys39Trp
- NP_001395328.1:p.Cys39Trp
- NP_001395329.1:p.Cys39Trp
- NP_001395330.1:p.Cys39Trp
- NP_001395331.1:p.Cys39Trp
- NP_001395332.1:p.Cys39Trp
- NP_001395333.1:p.Cys39Trp
- NP_001395335.1:p.Cys39Trp
- NP_001395336.1:p.Cys39Trp
- NP_001395337.1:p.Cys39Trp
- NP_001395338.1:p.Cys39Trp
- NP_001395340.1:p.Cys39Trp
- NP_001395341.1:p.Cys39Trp
- NP_001395342.1:p.Cys39Trp
- NP_001395343.1:p.Cys39Trp
- NP_001395344.1:p.Cys39Trp
- NP_001395345.1:p.Cys39Trp
- NP_001395347.1:p.Cys39Trp
- NP_001395348.1:p.Cys39Trp
- NP_001395349.1:p.Cys39Trp
- NP_001395350.1:p.Cys39Trp
- NP_001395351.1:p.Cys39Trp
- NP_001395352.1:p.Cys39Trp
- NP_001395353.1:p.Cys39Trp
- NP_001395354.1:p.Cys39Trp
- NP_001395355.1:p.Cys39Trp
- NP_001395356.1:p.Cys39Trp
- NP_001395357.1:p.Cys39Trp
- NP_001395358.1:p.Cys39Trp
- NP_001395359.1:p.Cys39Trp
- NP_001395360.1:p.Cys39Trp
- NP_001395361.1:p.Cys39Trp
- NP_001395362.1:p.Cys39Trp
- NP_001395363.1:p.Cys39Trp
- NP_001395364.1:p.Cys39Trp
- NP_001395365.1:p.Cys39Trp
- NP_001395366.1:p.Cys39Trp
- NP_001395367.1:p.Cys39Trp
- NP_001395368.1:p.Cys39Trp
- NP_001395369.1:p.Cys39Trp
- NP_001395370.1:p.Cys39Trp
- NP_001395371.1:p.Cys39Trp
- NP_001395372.1:p.Cys39Trp
- NP_001395373.1:p.Cys39Trp
- NP_001395374.1:p.Cys39Trp
- NP_001395375.1:p.Cys39Trp
- NP_001395376.1:p.Cys39Trp
- NP_001395377.1:p.Cys39Trp
- NP_001395379.1:p.Cys39Trp
- NP_001395401.1:p.Cys39Trp
- NP_001395402.1:p.Cys39Trp
- NP_001395403.1:p.Cys39Trp
- NP_001395404.1:p.Cys39Trp
- NP_001395405.1:p.Cys39Trp
- NP_001395423.1:p.Cys39Trp
- NP_001395424.1:p.Cys39Trp
- NP_009225.1:p.Cys39Trp
- NP_009225.1:p.Cys39Trp
- NP_009229.2:p.Cys39Trp
- NP_009229.2:p.Cys39Trp
- NP_009230.2:p.Cys39Trp
- NP_009231.2:p.Cys39Trp
- NP_009235.2:p.Cys39Trp
- LRG_292t1:c.117T>G
- LRG_292:g.102241T>G
- LRG_292p1:p.Cys39Trp
- NC_000017.10:g.41267760A>C
- NM_007294.3:c.117T>G
- NM_007298.3:c.117T>G
- NR_027676.2:n.319T>G
This HGVS expression did not pass validation- Protein change:
- C39W
- Links:
- dbSNP: rs886040898
- NCBI 1000 Genomes Browser:
- rs886040898
- Molecular consequence:
- NM_007297.4:c.-8+8274T>G - intron variant - [Sequence Ontology: SO:0001627]
- NM_001407581.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407582.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407583.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407585.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407587.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407590.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407591.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407593.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407594.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407596.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407597.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407598.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407602.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407603.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407605.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407610.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407611.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407612.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407613.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407614.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407615.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407616.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407617.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407618.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407619.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407620.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407621.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407622.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407623.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407624.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407625.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407626.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407627.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407628.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407629.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407630.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407631.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407632.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407633.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407634.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407635.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407636.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407637.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407638.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407639.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407640.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407641.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407642.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407644.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407645.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407646.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407647.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407648.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407649.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407652.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407653.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407654.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407655.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407656.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407657.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407658.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407659.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407660.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407661.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407662.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407663.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407664.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407665.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407666.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407667.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407668.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407669.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407670.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407671.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407672.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407673.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407674.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407675.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407676.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407677.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407678.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407679.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407680.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407681.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407682.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407683.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407684.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407685.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407686.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407687.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407688.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407689.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407690.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407691.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407854.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407858.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407859.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407860.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407861.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407862.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407863.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407874.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407875.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407919.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407937.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407938.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407939.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407940.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407941.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407968.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407969.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407970.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407971.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407972.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407973.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407974.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407975.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407976.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407977.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407978.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407979.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407980.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407981.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407982.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407983.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407984.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407985.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407986.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407990.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407991.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407992.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001407993.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408392.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408396.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408397.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408398.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408399.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408400.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408401.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408402.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408403.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408404.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408406.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408407.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408408.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408409.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408411.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408412.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408413.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408414.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408415.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408416.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408418.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408419.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408420.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408421.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408422.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408423.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408424.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408425.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408426.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408427.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408428.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408429.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408430.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408431.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408432.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408433.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408434.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408435.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408436.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408437.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408438.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408439.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408440.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408441.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408442.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408443.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408444.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408445.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408446.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408447.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408448.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408450.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408472.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408473.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408474.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408475.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408476.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408494.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_001408495.1:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007294.4:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007298.4:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007299.4:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007300.4:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NM_007304.2:c.117T>G - missense variant - [Sequence Ontology: SO:0001583]
- NR_027676.2:n.319T>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]
- Functional consequence:
- functionally_abnormal [Sequence Ontology: SO:0002218] - Comment(s)
- The saturation genome editing (SGE) assay for BRCA1 NM_007294.3:c.117T>G, a MISSENSE variant, produced a function score of -2.53, corresponding to a functional classification of LOSS_OF_FUNCTION. SGE function score ranges for classification are as follows: ‘functional’, score > -0.748; ‘intermediate’, -0.748 > score > -1.328; ‘non-functional’, score < -1.328. The median synonymous SNV scored 0.0 and the median nonsense SNV scored -2.12.
Condition(s)
- Name:
- Hereditary breast ovarian cancer syndrome
- Synonyms:
- Hereditary breast and ovarian cancer syndrome; Hereditary breast and ovarian cancer; Hereditary breast and ovarian cancer syndrome (HBOC); See all synonyms [MedGen]
- Identifiers:
- MONDO: MONDO:0003582; MeSH: D061325; MedGen: C0677776; Orphanet: 145
Assertion and evidence details
Submission Accession | Submitter | Review Status (Assertion method) | Clinical Significance (Last evaluated) | Origin | Method | Citations |
---|---|---|---|---|---|---|
SCV000832337 | Labcorp Genetics (formerly Invitae), Labcorp | criteria provided, single submitter (Invitae Variant Classification Sherloc (09022015)) | Pathogenic (Jan 30, 2019) | germline | clinical testing |
Summary from all submissions
Ethnicity | Origin | Affected | Individuals | Families | Chromosomes tested | Number Tested | Family history | Method |
---|---|---|---|---|---|---|---|---|
not provided | germline | unknown | not provided | not provided | not provided | not provided | not provided | clinical testing |
Citations
PubMed
Mechanisms of BRCA1 tumor suppression.
Silver DP, Livingston DM.
Cancer Discov. 2012 Aug;2(8):679-84. doi: 10.1158/2159-8290.CD-12-0221. Epub 2012 Jul 27. Review.
- PMID:
- 22843421
- PMCID:
- PMC3437262
The occurrence of germline BRCA1 and BRCA2 sequence alterations in Slovenian population.
Stegel V, Krajc M, Zgajnar J, Teugels E, De Grève J, Hočevar M, Novaković S.
BMC Med Genet. 2011 Jan 14;12:9. doi: 10.1186/1471-2350-12-9.
- PMID:
- 21232165
- PMCID:
- PMC3025939
Details of each submission
From Labcorp Genetics (formerly Invitae), Labcorp, SCV000832337.7
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (12) |
Description
This sequence change replaces cysteine with tryptophan at codon 39 of the BRCA1 protein (p.Cys39Trp). The cysteine residue is highly conserved and there is a large physicochemical difference between cysteine and tryptophan. For these reasons, this variant has been classified as Pathogenic. This variant disrupts the p.Cys39 amino acid residue in BRCA1, one of eight highly-conserved Cys/His residues in the N-terminal RING domain (PMID: 22843421). Other variant(s) that disrupt this residue have been observed in individuals with BRCA1-related conditions (PMID: 21232165, 23397983, 23683081, 17262179, 15024741, 18489799), suggesting that it is a clinically significant residue. As a result, variants that disrupt this residue are likely to be causative of disease. This variant has been reported to affect BRCA1 protein function (PMID: 25823446, 30209399). This variant has been observed in two families affected with breast and/or ovarian cancer (PMID: 22762150). It has also been reported in individuals in the Leiden Open-source Variation Database (PMID: 21520333). ClinVar contains an entry for this variant (Variation ID: 267497). This variant is not present in population databases (ExAC no frequency).
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
Last Updated: Oct 8, 2024