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NM_000371.4(TTR):c.242A>G (p.Glu81Gly) AND Amyloidosis, hereditary systemic 1

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 5, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000693859.5

Allele description [Variation Report for NM_000371.4(TTR):c.242A>G (p.Glu81Gly)]

NM_000371.4(TTR):c.242A>G (p.Glu81Gly)

Gene:
TTR:transthyretin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
18q12.1
Genomic location:
Preferred name:
NM_000371.4(TTR):c.242A>G (p.Glu81Gly)
HGVS:
  • NC_000018.10:g.31595161A>G
  • NG_009490.1:g.8395A>G
  • NM_000371.4:c.242A>GMANE SELECT
  • NP_000362.1:p.Glu81Gly
  • NP_000362.1:p.Glu81Gly
  • LRG_416t1:c.242A>G
  • LRG_416:g.8395A>G
  • LRG_416p1:p.Glu81Gly
  • NC_000018.9:g.29175124A>G
  • NM_000371.3:c.242A>G
Protein change:
E81G
Links:
dbSNP: rs1567946170
NCBI 1000 Genomes Browser:
rs1567946170
Molecular consequence:
  • NM_000371.4:c.242A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Amyloidosis, hereditary systemic 1 (AMYLD1)
Synonyms:
Amyloidosis Transthyretin related; Amyloid polyneuropathy transthyretin related; Transthyretin amyloidosis; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0971004; MedGen: C2751492; Orphanet: 85447; Orphanet: 85451; OMIM: 105210

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000822281Labcorp Genetics (formerly Invitae), Labcorp
criteria provided, single submitter

(Invitae Variant Classification Sherloc (09022015))
Uncertain significance
(Sep 5, 2021)
germlineclinical testing

PubMed (4)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

A basic transthyretin variant (Glu61-->Lys) causes familial amyloidotic polyneuropathy: protein and DNA sequencing and PCR-induced mutation restriction analysis.

Shiomi K, Nakazato M, Matsukura S, Ohnishi A, Hatanaka H, Tsuji S, Murai Y, Kojima M, Kangawa K, Matsuo H.

Biochem Biophys Res Commun. 1993 Aug 16;194(3):1090-6.

PubMed [citation]
PMID:
8352764

Clinical and pathological findings in familial amyloid polyneuropathy caused by a transthyretin E61K mutation.

Murakami T, Nishimura H, Nagai T, Hemmi S, Kutoku Y, Ohsawa Y, Sunada Y.

J Neurol Sci. 2017 Oct 15;381:55-58. doi: 10.1016/j.jns.2017.08.017. Epub 2017 Aug 12.

PubMed [citation]
PMID:
28991715
See all PubMed Citations (4)

Details of each submission

From Labcorp Genetics (formerly Invitae), Labcorp, SCV000822281.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (4)

Description

This variant is not present in population databases (ExAC no frequency). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This variant disrupts the p.Glu81 amino acid residue in TTR. Other variant(s) that disrupt this residue have been observed in individuals with TTR-related conditions (PMID: 8352764, 28991715), which suggests that this may be a clinically significant amino acid residue. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Not Available"; PolyPhen-2: "Benign"; Align-GVGD: "Not Available"). ClinVar contains an entry for this variant (Variation ID: 572472). This variant is also known as p.Glu61Lys. This missense change has been observed in individual(s) with familial transthyretin amyloidosis (PMID: 17453626). This sequence change replaces glutamic acid with glycine at codon 81 of the TTR protein (p.Glu81Gly). The glutamic acid residue is weakly conserved and there is a moderate physicochemical difference between glutamic acid and glycine.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024