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NM_001201543.2(FAM161A):c.1309A>T (p.Arg437Ter) AND Cone-rod dystrophy

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Sep 1, 2016
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000678572.8

Allele description [Variation Report for NM_001201543.2(FAM161A):c.1309A>T (p.Arg437Ter)]

NM_001201543.2(FAM161A):c.1309A>T (p.Arg437Ter)

Gene:
FAM161A:FAM161 centrosomal protein A [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2p15
Genomic location:
Preferred name:
NM_001201543.2(FAM161A):c.1309A>T (p.Arg437Ter)
HGVS:
  • NC_000002.12:g.61839695T>A
  • NG_028125.1:g.19449A>T
  • NM_001201543.2:c.1309A>TMANE SELECT
  • NM_032180.3:c.1309A>T
  • NP_001188472.1:p.Arg437Ter
  • NP_115556.2:p.Arg437Ter
  • NC_000002.11:g.62066830T>A
  • NM_001201543.1:c.1309A>T
  • NM_032180.2:c.1309A>T
  • NP_115556.2:p.Arg437*
  • NR_037710.2:n.1272A>T
Protein change:
R437*; ARG437TER
Links:
OMIM: 613596.0002; dbSNP: rs200691042
NCBI 1000 Genomes Browser:
rs200691042
Molecular consequence:
  • NR_037710.2:n.1272A>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_001201543.2:c.1309A>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_032180.3:c.1309A>T - nonsense - [Sequence Ontology: SO:0001587]
Observations:
1

Condition(s)

Name:
Cone-rod dystrophy
Synonyms:
Cone/cone-rod dystrophy; Cone-rod degeneration
Identifiers:
MONDO: MONDO:0015993; MedGen: C4085590; OMIM: PS120970; Human Phenotype Ontology: HP:0000548

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000804651Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+
no assertion criteria provided
Pathogenic
(Sep 1, 2016)
inheritedclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyes1not providednot providednot providednot providedclinical testing

Details of each submission

From Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+, SCV000804651.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Nov 10, 2024