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NM_001256789.3(CACNA1F):c.2968G>A (p.Gly990Arg) AND Retinitis pigmentosa

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 1, 2016
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000678530.2

Allele description [Variation Report for NM_001256789.3(CACNA1F):c.2968G>A (p.Gly990Arg)]

NM_001256789.3(CACNA1F):c.2968G>A (p.Gly990Arg)

Gene:
CACNA1F:calcium voltage-gated channel subunit alpha1 F [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp11.23
Genomic location:
Preferred name:
NM_001256789.3(CACNA1F):c.2968G>A (p.Gly990Arg)
HGVS:
  • NC_000023.11:g.49217966C>T
  • NG_009095.2:g.20401G>A
  • NM_001256789.3:c.2968G>AMANE SELECT
  • NM_001256790.3:c.2806G>A
  • NM_005183.4:c.3001G>A
  • NP_001243718.1:p.Gly990Arg
  • NP_001243719.1:p.Gly936Arg
  • NP_005174.2:p.Gly1001Arg
  • NC_000023.10:g.49074425C>T
  • NM_005183.2:c.3001G>A
Protein change:
G1001R
Links:
dbSNP: rs782473510
NCBI 1000 Genomes Browser:
rs782473510
Molecular consequence:
  • NM_001256789.3:c.2968G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001256790.3:c.2806G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005183.4:c.3001G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Retinitis pigmentosa (RP)
Synonyms:
Tapetoretinal degeneration
Identifiers:
MONDO: MONDO:0019200; MeSH: D012174; MedGen: C0035334; Orphanet: 791; OMIM: 268000; OMIM: PS268000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000804604Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+
no assertion criteria provided
Uncertain significance
(Sep 1, 2016)
unknownclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes1not providednot providednot providednot providedclinical testing

Details of each submission

From Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+, SCV000804604.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Jun 3, 2022