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NM_024622.6(FASTKD1):c.2230T>A (p.Tyr744Asn) AND Glaucoma 1, open angle, B

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jul 20, 2017
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000663362.2

Allele description [Variation Report for NM_024622.6(FASTKD1):c.2230T>A (p.Tyr744Asn)]

NM_024622.6(FASTKD1):c.2230T>A (p.Tyr744Asn)

Gene:
FASTKD1:FAST kinase domains 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q31.1
Genomic location:
Preferred name:
NM_024622.6(FASTKD1):c.2230T>A (p.Tyr744Asn)
HGVS:
  • NC_000002.12:g.169531449A>T
  • NM_001281476.3:c.2101T>A
  • NM_001322046.2:c.2230T>A
  • NM_001322048.2:c.2161T>A
  • NM_001322049.2:c.2032T>A
  • NM_024622.6:c.2230T>AMANE SELECT
  • NP_001268405.1:p.Tyr701Asn
  • NP_001308975.1:p.Tyr744Asn
  • NP_001308975.1:p.Tyr744Asn
  • NP_001308977.1:p.Tyr721Asn
  • NP_001308978.1:p.Tyr678Asn
  • NP_078898.3:p.Tyr744Asn
  • NC_000002.11:g.170387959A>T
  • NM_001322046.1:c.2230T>A
  • NR_104020.3:n.2436T>A
  • p.Y744N
Protein change:
Y678N
Links:
dbSNP: rs1553534421
NCBI 1000 Genomes Browser:
rs1553534421
Molecular consequence:
  • NM_001281476.3:c.2101T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001322046.2:c.2230T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001322048.2:c.2161T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001322049.2:c.2032T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_024622.6:c.2230T>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_104020.3:n.2436T>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Functional consequence:
Uncertain function

Condition(s)

Name:
Glaucoma 1, open angle, B
Synonyms:
GLC1B
Identifiers:
MedGen: C3887942; OMIM: 606689

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000786638Centro de Genética y Biología Molecular, Universidad de San Martín de Porres
no assertion criteria provided
Pathogenic
(Jul 20, 2017)
germlinecase-control

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes51not providednot providednot providedcase-control

Details of each submission

From Centro de Genética y Biología Molecular, Universidad de San Martín de Porres, SCV000786638.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided5not providednot providedcase-controlnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided5not provided1not provided

Last Updated: Jun 23, 2024