NM_000059.4(BRCA2):c.2920G>A (p.Asp974Asn) AND not provided

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jun 25, 2019
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000657012.12

Allele description [Variation Report for NM_000059.4(BRCA2):c.2920G>A (p.Asp974Asn)]

NM_000059.4(BRCA2):c.2920G>A (p.Asp974Asn)

Gene:

BRCA2:BRCA2 DNA repair associated [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

13q13.1

Genomic location:

Preferred name:

NM_000059.4(BRCA2):c.2920G>A (p.Asp974Asn)

HGVS:

NC_000013.11:g.32337275G>A
NG_012772.3:g.26796G>A
NM_000059.4:c.2920G>AMANE SELECT
NP_000050.2:p.Asp974Asn
NP_000050.3:p.Asp974Asn
LRG_293t1:c.2920G>A
LRG_293:g.26796G>A
LRG_293p1:p.Asp974Asn
NC_000013.10:g.32911412G>A
NM_000059.3:c.2920G>A
p.D974N

Protein change:

D974N

Links:

dbSNP: rs539613324

NCBI 1000 Genomes Browser:

rs539613324

Molecular consequence:

NM_000059.4:c.2920G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

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Homo sapiens SPOC domain containing 1, mRNA (cDNA clone IMAGE:4184930), partial ...
Homo sapiens SPOC domain containing 1, mRNA (cDNA clone IMAGE:4184930), partial cds
gi|34192987|gb|BC039870.2|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000566362	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Uncertain significance (Jun 25, 2019)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000566362

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Uncertain significance
(Jun 25, 2019)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV000566362.7

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

Not observed at a significant frequency in large population cohorts (Lek 2016); In silico analysis, which includes protein predictors and evolutionary conservation, supports a deleterious effect; also known as 3148G>A; Observed in individuals with breast and ovarian cancer as well as in healthy controls (Kim 2016, Kwong 2016); This variant is associated with the following publications: (PMID: 26848529, 27157322, 31825140)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 3, 2024

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