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NM_001253852.3(AP4B1):c.1345A>T (p.Arg449Ter) AND Inborn genetic diseases

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Nov 30, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000624560.2

Allele description [Variation Report for NM_001253852.3(AP4B1):c.1345A>T (p.Arg449Ter)]

NM_001253852.3(AP4B1):c.1345A>T (p.Arg449Ter)

Genes:
AP4B1-AS1:AP4B1 antisense RNA 1 [Gene - HGNC]
AP4B1:adaptor related protein complex 4 subunit beta 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p13.2
Genomic location:
Preferred name:
NM_001253852.3(AP4B1):c.1345A>T (p.Arg449Ter)
HGVS:
  • NC_000001.11:g.113896423T>A
  • NG_031901.1:g.13697A>T
  • NM_001253852.3:c.1345A>TMANE SELECT
  • NM_001253853.3:c.1048A>T
  • NM_001308312.2:c.841A>T
  • NM_006594.5:c.1345A>T
  • NP_001240781.1:p.Arg449Ter
  • NP_001240782.1:p.Arg350Ter
  • NP_001295241.1:p.Arg281Ter
  • NP_006585.2:p.Arg449Ter
  • NC_000001.10:g.114439045T>A
  • NM_001253852.1:c.1345A>T
  • NM_006594.2:c.1345A>T
Protein change:
R281*
Links:
dbSNP: rs142209254
NCBI 1000 Genomes Browser:
rs142209254
Molecular consequence:
  • NM_001253852.3:c.1345A>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001253853.3:c.1048A>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001308312.2:c.841A>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_006594.5:c.1345A>T - nonsense - [Sequence Ontology: SO:0001587]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000742036Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Pathogenic
(Nov 30, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Asian/Ashkenazi Jewishgermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000742036.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Asian/Ashkenazi Jewish1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Jan 7, 2023