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NM_000284.4(PDHA1):c.616G>C (p.Glu206Gln) AND Inborn genetic diseases

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Dec 15, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000623785.3

Allele description [Variation Report for NM_000284.4(PDHA1):c.616G>C (p.Glu206Gln)]

NM_000284.4(PDHA1):c.616G>C (p.Glu206Gln)

Gene:
PDHA1:pyruvate dehydrogenase E1 subunit alpha 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp22.12
Genomic location:
Preferred name:
NM_000284.4(PDHA1):c.616G>C (p.Glu206Gln)
HGVS:
  • NC_000023.11:g.19355361G>C
  • NG_016781.1:g.16469G>C
  • NM_000284.4:c.616G>CMANE SELECT
  • NM_001173454.2:c.730G>C
  • NM_001173455.2:c.637G>C
  • NM_001173456.2:c.523G>C
  • NP_000275.1:p.Glu206Gln
  • NP_001166925.1:p.Glu244Gln
  • NP_001166926.1:p.Glu213Gln
  • NP_001166927.1:p.Glu175Gln
  • NC_000023.10:g.19373479G>C
  • NM_000284.3:c.616G>C
Protein change:
E175Q
Links:
dbSNP: rs1555934336
NCBI 1000 Genomes Browser:
rs1555934336
Molecular consequence:
  • NM_000284.4:c.616G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001173454.2:c.730G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001173455.2:c.637G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001173456.2:c.523G>C - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000741998Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Likely pathogenic
(Dec 15, 2016)
germlineclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Caucasiangermlineyes1not providednot provided1not providedclinical testing

Citations

PubMed

Structural basis for flip-flop action of thiamin pyrophosphate-dependent enzymes revealed by human pyruvate dehydrogenase.

Ciszak EM, Korotchkina LG, Dominiak PM, Sidhu S, Patel MS.

J Biol Chem. 2003 Jun 6;278(23):21240-6. Epub 2003 Mar 21.

PubMed [citation]
PMID:
12651851

Four novel PDHA1 mutations in pyruvate dehydrogenase deficiency.

Ostergaard E, Moller LB, Kalkanoglu-Sivri HS, Dursun A, Kibaek M, Thelle T, Christensen E, Duno M, Wibrand F.

J Inherit Metab Dis. 2009 Dec;32 Suppl 1:S235-9. doi: 10.1007/s10545-009-1179-8. Epub 2009 Jun 11.

PubMed [citation]
PMID:
19517265

Details of each submission

From Ambry Genetics, SCV000741998.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Caucasian1not providednot providedclinical testing PubMed (2)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Jan 7, 2023