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NM_152296.5(ATP1A3):c.2323C>A (p.Pro775Thr) AND Inborn genetic diseases

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Sep 25, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000623530.3

Allele description [Variation Report for NM_152296.5(ATP1A3):c.2323C>A (p.Pro775Thr)]

NM_152296.5(ATP1A3):c.2323C>A (p.Pro775Thr)

Gene:
ATP1A3:ATPase Na+/K+ transporting subunit alpha 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.2
Genomic location:
Preferred name:
NM_152296.5(ATP1A3):c.2323C>A (p.Pro775Thr)
HGVS:
  • NC_000019.10:g.41970483G>T
  • NG_008015.1:g.28748C>A
  • NM_001256213.2:c.2356C>A
  • NM_001256214.2:c.2362C>A
  • NM_152296.5:c.2323C>AMANE SELECT
  • NP_001243142.1:p.Pro786Thr
  • NP_001243143.1:p.Pro788Thr
  • NP_689509.1:p.Pro775Thr
  • LRG_1186t1:c.2323C>A
  • LRG_1186:g.28748C>A
  • LRG_1186p1:p.Pro775Thr
  • NC_000019.9:g.42474635G>T
  • NM_152296.3:c.2323C>A
Protein change:
P775T
Links:
dbSNP: rs1555859593
NCBI 1000 Genomes Browser:
rs1555859593
Molecular consequence:
  • NM_001256213.2:c.2356C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001256214.2:c.2362C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_152296.5:c.2323C>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000741052Ambry Genetics
criteria provided, single submitter

(Ambry exome assertion method (8-5-2015))
Likely pathogenic
(Sep 25, 2015)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
unknowngermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000741052.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1unknown1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Oct 20, 2024