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NM_000363.5(TNNI3):c.434G>A (p.Arg145Gln) AND Cardiovascular phenotype

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
May 18, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000621089.4

Allele description [Variation Report for NM_000363.5(TNNI3):c.434G>A (p.Arg145Gln)]

NM_000363.5(TNNI3):c.434G>A (p.Arg145Gln)

Gene:
TNNI3:troponin I3, cardiac type [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.42
Genomic location:
Preferred name:
NM_000363.5(TNNI3):c.434G>A (p.Arg145Gln)
Other names:
p.R145Q:CGG>CAG
HGVS:
  • NC_000019.10:g.55154145C>T
  • NG_007866.2:g.8588G>A
  • NG_011829.2:g.94G>A
  • NM_000363.5:c.434G>AMANE SELECT
  • NP_000354.4:p.Arg145Gln
  • LRG_432t1:c.434G>A
  • LRG_432:g.8588G>A
  • LRG_679:g.94G>A
  • NC_000019.9:g.55665513C>T
  • NM_000363.4:c.434G>A
  • c.434G>A
Protein change:
R145Q
Links:
dbSNP: rs397516349
NCBI 1000 Genomes Browser:
rs397516349
Molecular consequence:
  • NM_000363.5:c.434G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Cardiovascular phenotype
Identifiers:
MedGen: CN230736

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000740143Ambry Genetics
criteria provided, single submitter

(Ambry General Variant Classification Scheme_2022)
Likely pathogenic
(May 18, 2023)
germlineclinical testing

PubMed (15)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Functional consequences of the mutations in human cardiac troponin I gene found in familial hypertrophic cardiomyopathy.

Takahashi-Yanaga F, Morimoto S, Harada K, Minakami R, Shiraishi F, Ohta M, Lu QW, Sasaguri T, Ohtsuki I.

J Mol Cell Cardiol. 2001 Dec;33(12):2095-107.

PubMed [citation]
PMID:
11735257

Frequency and clinical expression of cardiac troponin I mutations in 748 consecutive families with hypertrophic cardiomyopathy.

Mogensen J, Murphy RT, Kubo T, Bahl A, Moon JC, Klausen IC, Elliott PM, McKenna WJ.

J Am Coll Cardiol. 2004 Dec 21;44(12):2315-25.

PubMed [citation]
PMID:
15607392
See all PubMed Citations (15)

Details of each submission

From Ambry Genetics, SCV000740143.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (15)

Description

The p.R145Q variant (also known as c.434G>A), located in coding exon 7 of the TNNI3 gene, results from a G to A substitution at nucleotide position 434. The arginine at codon 145 is replaced by glutamine, an amino acid with highly similar properties. This alteration has been reported in individuals with hypertrophic cardiomyopathy (HCM) and restrictive cardiomyopathy (RCM), although in some cases it co-occurred with alterations in TNNI3 or other cardiac-related genes (Kimura A et al. Nat Genet. 1997;16:379-82; Mogensen J et al. J Am Coll Cardiol. 2004;44:2315-25; van den Wijngaard A et al. Neth Heart J. 2011;19:344-51; Zou Y et al. Mol Biol Rep. 2013;40:3969-76; Berge KE et al. Clin Genet. 2014;86:355-60; Wang J et al. Eur J Heart Fail. 2014;16:950-7; Kim HY et al. J Clin Med, 2020 Jun;9:[Epub ahead of print]). This variant was reported to co-segregate with disease in two families, including one family with a pair of apparently homozygous affected siblings (Robyns T et al. Eur J Hum Genet, 2017 12;25:1313-1323; Al-Shafai KN et al. Mol Genet Genomic Med, 2021 Jul;9:e1709). In vitro functional studies indicate this alteration results in reduced intrinsic inhibitory activity, increased calcium sensitivity of myofibrillar ATPase activity and increased force generation of skinned muscle fibers (Takahashi-Yanaga F et al. J Mol Cell Cardiol. 2001;33:2095-107). This amino acid position is well conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Based on the supporting evidence, this variant is expected to be causative of autosomal dominant TNNI3-related cardiomyopathy; however, its clinical significance for autosomal recessive TNNI3-related dilated cardiomyopathy is unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 20, 2024