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NM_004415.4(DSP):c.7575C>T (p.Gly2525=) AND Cardiovascular phenotype

Germline classification:
Likely benign (1 submission)
Last evaluated:
Feb 23, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000620037.3

Allele description [Variation Report for NM_004415.4(DSP):c.7575C>T (p.Gly2525=)]

NM_004415.4(DSP):c.7575C>T (p.Gly2525=)

Gene:
DSP:desmoplakin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6p24.3
Genomic location:
Preferred name:
NM_004415.4(DSP):c.7575C>T (p.Gly2525=)
Other names:
p.G2525G:GGC>GGT
HGVS:
  • NC_000006.12:g.7584837C>T
  • NG_008803.1:g.48201C>T
  • NM_001008844.3:c.5778C>T
  • NM_001319034.2:c.6246C>T
  • NM_004415.4:c.7575C>TMANE SELECT
  • NP_001008844.1:p.Gly1926=
  • NP_001305963.1:p.Gly2082=
  • NP_004406.2:p.Gly2525=
  • LRG_423t1:c.7575C>T
  • LRG_423:g.48201C>T
  • NC_000006.11:g.7585070C>T
  • NM_004415.2:c.7575C>T
Links:
dbSNP: rs780156504
NCBI 1000 Genomes Browser:
rs780156504
Molecular consequence:
  • NM_001008844.3:c.5778C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001319034.2:c.6246C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_004415.4:c.7575C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Cardiovascular phenotype
Identifiers:
MedGen: CN230736

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Assertion and evidence details

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Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000736045Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Likely benign
(Feb 23, 2021) 		germlineclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV000736045.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024