NM_001103.4(ACTN2):c.361+5G>C AND Cardiovascular phenotype

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Dec 29, 2016
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000618189.3

Allele description [Variation Report for NM_001103.4(ACTN2):c.361+5G>C]

NM_001103.4(ACTN2):c.361+5G>C

Gene:

ACTN2:actinin alpha 2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

1q43

Genomic location:

Preferred name:

NM_001103.4(ACTN2):c.361+5G>C

HGVS:

NC_000001.11:g.236719018G>C
NG_009081.2:g.59878G>C
NM_001103.4:c.361+5G>CMANE SELECT
NM_001278343.2:c.361+5G>C
NM_001278344.2:c.-461+5G>C
LRG_436t1:c.361+5G>C
LRG_436:g.59878G>C
NC_000001.10:g.236882318G>C
NG_009081.1:g.37549G>C
NM_001103.2:c.361+5G>C

Links:

dbSNP: rs1553300073

NCBI 1000 Genomes Browser:

rs1553300073

Molecular consequence:

NM_001103.4:c.361+5G>C - intron variant - [Sequence Ontology: SO:0001627]
NM_001278343.2:c.361+5G>C - intron variant - [Sequence Ontology: SO:0001627]
NM_001278344.2:c.-461+5G>C - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:: Cardiovascular phenotype
Identifiers:: MedGen: CN230736

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000740101	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Dec 29, 2016)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000740101

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Dec 29, 2016)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV000740101.5

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.361+5G>C intronic variant results from a G to C substitution 5 nucleotides after coding exon 3 in the ACTN2 gene. This nucleotide position is highly conserved in available vertebrate species. Using the BDGP and ESEfinder splice site prediction tools, this alteration is predicted to weaken the efficiency of the native splice donor site; however, direct evidence is unavailable. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: May 1, 2024

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