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NM_000155.4(GALT):c.172G>A (p.Glu58Lys) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Feb 2, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000589593.2

Allele description [Variation Report for NM_000155.4(GALT):c.172G>A (p.Glu58Lys)]

NM_000155.4(GALT):c.172G>A (p.Glu58Lys)

Genes:
LOC130001683:ATAC-STARR-seq lymphoblastoid active region 28314 [Gene]
GALT:galactose-1-phosphate uridylyltransferase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9p13.3
Genomic location:
Preferred name:
NM_000155.4(GALT):c.172G>A (p.Glu58Lys)
HGVS:
  • NC_000009.12:g.34647178G>A
  • NG_009029.2:g.5590G>A
  • NM_000155.4:c.172G>AMANE SELECT
  • NM_001258332.2:c.-31G>A
  • NP_000146.2:p.Glu58Lys
  • NC_000009.11:g.34647175G>A
  • NM_000155.2:c.172G>A
Protein change:
E58K
Links:
dbSNP: rs1554709147
NCBI 1000 Genomes Browser:
rs1554709147
Molecular consequence:
  • NM_001258332.2:c.-31G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_000155.4:c.172G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000695682Women's Health and Genetics/Laboratory Corporation of America, LabCorp
criteria provided, single submitter

(LabCorp Variant Classification Summary - May 2015)
Uncertain significance
(Feb 2, 2016)
germlineclinical testing

LabCorp Variant Classification Summary - May 2015.docx

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Women's Health and Genetics/Laboratory Corporation of America, LabCorp, SCV000695682.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 16, 2024