U.S. flag

An official website of the United States government

NM_000530.8(MPZ):c.368G>A (p.Gly123Asp) AND not provided

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jul 18, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000521410.2

Allele description [Variation Report for NM_000530.8(MPZ):c.368G>A (p.Gly123Asp)]

NM_000530.8(MPZ):c.368G>A (p.Gly123Asp)

Gene:
MPZ:myelin protein zero [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q23.3
Genomic location:
Preferred name:
NM_000530.8(MPZ):c.368G>A (p.Gly123Asp)
HGVS:
  • NC_000001.11:g.161306788C>T
  • NG_008055.1:g.8185G>A
  • NM_000530.8:c.368G>AMANE SELECT
  • NM_001315491.2:c.368G>A
  • NP_000521.2:p.Gly123Asp
  • NP_001302420.1:p.Gly123Asp
  • LRG_256t1:c.368G>A
  • LRG_256:g.8185G>A
  • NC_000001.10:g.161276578C>T
  • NM_000530.6:c.368G>A
Protein change:
G123D
Links:
dbSNP: rs1553259656
NCBI 1000 Genomes Browser:
rs1553259656
Molecular consequence:
  • NM_000530.8:c.368G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001315491.2:c.368G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000617780GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Likely pathogenic
(Jul 18, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000617780.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The G123D variant in the MPZ gene was identified via direct sequencing of the MPZ gene an a female patient with Déjérine-Sottas syndrome, which onset at two years of age (Braathen et al., 2010). The G123D variant is not observed in large population cohorts (Lek et al., 2016; 1000 Genomes Consortium et al., 2015; Exome Variant Server). The G123D variant is a non-conservative amino acid substitution, which is likely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties. This substitution occurs at a position within the extracellular domain that is conserved across species. In silico analysis predicts this variant is probably damaging to the protein structure/function. Missense variants at this residue (G123C, G123S) and in nearby residues (Y119C, D121N, N122S, T124A, T124M, T124K, C127S, C127Y) have been reported in the Human Gene Mutation Database in association with Charcot-Marie-Tooth disease (Stenson et al., 2014), supporting the functional importance of this region of the protein. We interpret G123D as a likely pathogenic variant.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 23, 2024