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NM_000162.5(GCK):c.1190G>T (p.Arg397Leu) AND not provided

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Nov 21, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000518294.2

Allele description [Variation Report for NM_000162.5(GCK):c.1190G>T (p.Arg397Leu)]

NM_000162.5(GCK):c.1190G>T (p.Arg397Leu)

Gene:
GCK:glucokinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7p13
Genomic location:
Preferred name:
NM_000162.5(GCK):c.1190G>T (p.Arg397Leu)
Other names:
NM_000162.5(GCK):c.1190G>T; p.Arg397Leu
HGVS:
  • NC_000007.14:g.44145560C>A
  • NG_008847.2:g.57611G>T
  • NM_000162.5:c.1190G>TMANE SELECT
  • NM_001354800.1:c.1190G>T
  • NM_001354801.1:c.179G>T
  • NM_001354802.1:c.50G>T
  • NM_001354803.2:c.224G>T
  • NM_033507.3:c.1193G>T
  • NM_033508.3:c.1187G>T
  • NP_000153.1:p.Arg397Leu
  • NP_001341729.1:p.Arg397Leu
  • NP_001341730.1:p.Arg60Leu
  • NP_001341731.1:p.Arg17Leu
  • NP_001341732.1:p.Arg75Leu
  • NP_277042.1:p.Arg398Leu
  • NP_277043.1:p.Arg396Leu
  • LRG_1074t1:c.1190G>T
  • LRG_1074t2:c.1193G>T
  • LRG_1074:g.57611G>T
  • LRG_1074p1:p.Arg397Leu
  • LRG_1074p2:p.Arg398Leu
  • NC_000007.13:g.44185159C>A
  • NM_000162.3:c.1190G>T
  • p.ARG397LEU
Protein change:
R17L
Links:
dbSNP: rs193929375
NCBI 1000 Genomes Browser:
rs193929375
Molecular consequence:
  • NM_000162.5:c.1190G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354800.1:c.1190G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354801.1:c.179G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354802.1:c.50G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354803.2:c.224G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033507.3:c.1193G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033508.3:c.1187G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000613406Athena Diagnostics
criteria provided, single submitter

(Athena Diagnostics Criteria)
Likely pathogenic
(Nov 21, 2016)
germlineclinical testing

PubMed (4)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Permanent neonatal diabetes in an Asian infant.

Porter JR, Shaw NJ, Barrett TG, Hattersley AT, Ellard S, Gloyn AL.

J Pediatr. 2005 Jan;146(1):131-3. Review.

PubMed [citation]
PMID:
15644838

Functional analysis of human glucokinase gene mutations causing MODY2: exploring the regulatory mechanisms of glucokinase activity.

García-Herrero CM, Galán M, Vincent O, Flández B, Gargallo M, Delgado-Alvarez E, Blázquez E, Navas MA.

Diabetologia. 2007 Feb;50(2):325-33. Epub 2006 Dec 21.

PubMed [citation]
PMID:
17186219
See all PubMed Citations (4)

Details of each submission

From Athena Diagnostics, SCV000613406.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (4)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 7, 2024