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NM_000162.5(GCK):c.499T>C (p.Trp167Arg) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 1, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000517391.3

Allele description [Variation Report for NM_000162.5(GCK):c.499T>C (p.Trp167Arg)]

NM_000162.5(GCK):c.499T>C (p.Trp167Arg)

Gene:
GCK:glucokinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7p13
Genomic location:
Preferred name:
NM_000162.5(GCK):c.499T>C (p.Trp167Arg)
HGVS:
  • NC_000007.14:g.44150049A>G
  • NG_008847.2:g.53122T>C
  • NM_000162.5:c.499T>CMANE SELECT
  • NM_001354800.1:c.499T>C
  • NM_033507.3:c.502T>C
  • NM_033508.3:c.496T>C
  • NP_000153.1:p.Trp167Arg
  • NP_001341729.1:p.Trp167Arg
  • NP_277042.1:p.Trp168Arg
  • NP_277043.1:p.Trp166Arg
  • LRG_1074t1:c.499T>C
  • LRG_1074t2:c.502T>C
  • LRG_1074:g.53122T>C
  • LRG_1074p1:p.Trp167Arg
  • LRG_1074p2:p.Trp168Arg
  • NC_000007.13:g.44189648A>G
  • NM_000162.3:c.499T>C
  • p.TRP167ARG
Protein change:
W166R
Links:
dbSNP: rs1481197092
NCBI 1000 Genomes Browser:
rs1481197092
Molecular consequence:
  • NM_000162.5:c.499T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354800.1:c.499T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033507.3:c.502T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_033508.3:c.496T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

Recent activity

  • DGKB [Capra hircus]
    DGKB [Capra hircus]
    Gene ID:102176295
    Gene
  • Beak
    Beak
    In some animals, the jaws together with their horny covering. The beak usually refers to the bill of birds in which the whole varies greatly in form according of the food and ...<br/>Year introduced: 1968
    MeSH

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000613439Athena Diagnostics
criteria provided, single submitter

(Athena Diagnostics Criteria)
Uncertain significance
(May 1, 2017)
germlineclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

The glucokinase mutation p.T206P is common among MODY patients of Jewish Ashkenazi descent.

Gozlan Y, Tenenbaum A, Shalitin S, Lebenthal Y, Oron T, Cohen O, Phillip M, Gat-Yablonski G.

Pediatr Diabetes. 2012 Sep;13(6):e14-21. doi: 10.1111/j.1399-5448.2011.00822.x. Epub 2011 Oct 7.

PubMed [citation]
PMID:
21978167

A Standardized DNA Variant Scoring System for Pathogenicity Assessments in Mendelian Disorders.

Karbassi I, Maston GA, Love A, DiVincenzo C, Braastad CD, Elzinga CD, Bright AR, Previte D, Zhang K, Rowland CM, McCarthy M, Lapierre JL, Dubois F, Medeiros KA, Batish SD, Jones J, Liaquat K, Hoffman CA, Jaremko M, Wang Z, Sun W, Buller-Burckle A, et al.

Hum Mutat. 2016 Jan;37(1):127-34. doi: 10.1002/humu.22918. Epub 2015 Oct 29.

PubMed [citation]
PMID:
26467025
PMCID:
PMC4737317

Details of each submission

From Athena Diagnostics, SCV000613439.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (2)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 7, 2024