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NM_022552.5(DNMT3A):c.1743G>T (p.Trp581Cys) AND Tatton-Brown-Rahman overgrowth syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Oct 12, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000515481.1

Allele description [Variation Report for NM_022552.5(DNMT3A):c.1743G>T (p.Trp581Cys)]

NM_022552.5(DNMT3A):c.1743G>T (p.Trp581Cys)

Gene:
DNMT3A:DNA methyltransferase 3 alpha [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2p23.3
Genomic location:
Preferred name:
NM_022552.5(DNMT3A):c.1743G>T (p.Trp581Cys)
HGVS:
  • NC_000002.12:g.25244263C>A
  • NG_029465.2:g.103328G>T
  • NM_001320893.1:c.1287G>T
  • NM_001375819.1:c.1074G>T
  • NM_022552.5:c.1743G>TMANE SELECT
  • NM_153759.3:c.1176G>T
  • NM_175629.2:c.1743G>T
  • NP_001307822.1:p.Trp429Cys
  • NP_001362748.1:p.Trp358Cys
  • NP_072046.2:p.Trp581Cys
  • NP_715640.2:p.Trp392Cys
  • NP_783328.1:p.Trp581Cys
  • LRG_459t2:c.1176G>T
  • LRG_459t4:c.1743G>T
  • LRG_459:g.103328G>T
  • LRG_459p2:p.Trp392Cys
  • LRG_459p4:p.Trp581Cys
  • NC_000002.11:g.25467132C>A
  • NR_135490.2:n.1974G>T
Protein change:
W358C
Links:
dbSNP: rs769419803
NCBI 1000 Genomes Browser:
rs769419803
Molecular consequence:
  • NM_001320893.1:c.1287G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001375819.1:c.1074G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_022552.5:c.1743G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_153759.3:c.1176G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_175629.2:c.1743G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_135490.2:n.1974G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Tatton-Brown-Rahman overgrowth syndrome
Synonyms:
Tatton-Brown-rahman syndrome; Tall stature-intellectual disability-facial dysmorphism syndrome
Identifiers:
MONDO: MONDO:0014382; MedGen: C4014545; Orphanet: 404443; OMIM: 615879

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000611599HudsonAlpha Institute for Biotechnology, HudsonAlpha Institute for Biotechnology - CSER-HudsonAlpha
criteria provided, single submitter

(HA_assertions_20161101)
Uncertain significance
(Oct 12, 2017)
de novoresearch

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedde novoyes1not providednot provided1not providedresearch

Details of each submission

From HudsonAlpha Institute for Biotechnology, HudsonAlpha Institute for Biotechnology - CSER-HudsonAlpha, SCV000611599.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1de novoyes1not providednot provided1not providednot providednot provided

Last Updated: Jun 17, 2023