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NM_000257.4(MYH7):c.3743T>A (p.Met1248Lys) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 31, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000498303.1

Allele description [Variation Report for NM_000257.4(MYH7):c.3743T>A (p.Met1248Lys)]

NM_000257.4(MYH7):c.3743T>A (p.Met1248Lys)

Gene:
MYH7:myosin heavy chain 7 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
14q11.2
Genomic location:
Preferred name:
NM_000257.4(MYH7):c.3743T>A (p.Met1248Lys)
HGVS:
  • NC_000014.9:g.23419593A>T
  • NG_007884.1:g.21069T>A
  • NM_000257.4:c.3743T>AMANE SELECT
  • NP_000248.2:p.Met1248Lys
  • LRG_384t1:c.3743T>A
  • LRG_384:g.21069T>A
  • NC_000014.8:g.23888802A>T
  • NM_000257.2:c.3743T>A
  • NM_000257.3:c.3743T>A
Protein change:
M1248K
Links:
dbSNP: rs1060501434
NCBI 1000 Genomes Browser:
rs1060501434
Molecular consequence:
  • NM_000257.4:c.3743T>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000590148GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(May 31, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000590148.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

A variant of uncertain significance has been identified in the MYH7 gene. The M1248K variant has not been published as pathogenic or been reported as benign to our knowledge. However, it is classified as a variant of uncertain significance in ClinVar by a different clinical laboratory in association with HCM (ClinVar SCV000546191.1; Landrum et al., 2016). The M1248K variant is also not observed in large population cohorts (Lek et al., 2016; 1000 Genomes Consortium et al., 2015; Exome Variant Server). Additionally, M1248K is a non-conservative amino acid substitution, which is likely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties. Furthermore, this substitution occurs at a position that is conserved in mammals and in silico analysis predicts this variant is probably damaging to the protein structure/function. Nevertheless, this variant has not been observed in a significant number of affected individuals and it lacks both segregation and functional studies which would further clarify its pathogenicity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024