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NM_000138.5(FBN1):c.1753G>A (p.Gly585Arg) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 24, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000490226.1

Allele description [Variation Report for NM_000138.5(FBN1):c.1753G>A (p.Gly585Arg)]

NM_000138.5(FBN1):c.1753G>A (p.Gly585Arg)

Gene:
FBN1:fibrillin 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q21.1
Genomic location:
Preferred name:
NM_000138.5(FBN1):c.1753G>A (p.Gly585Arg)
HGVS:
  • NC_000015.10:g.48508666C>T
  • NG_008805.2:g.142123G>A
  • NM_000138.5:c.1753G>AMANE SELECT
  • NP_000129.3:p.Gly585Arg
  • NP_000129.3:p.Gly585Arg
  • LRG_778t1:c.1753G>A
  • LRG_778:g.142123G>A
  • LRG_778p1:p.Gly585Arg
  • NC_000015.9:g.48800863C>T
  • NM_000138.4:c.1753G>A
Protein change:
G585R
Links:
dbSNP: rs1085307528
NCBI 1000 Genomes Browser:
rs1085307528
Molecular consequence:
  • NM_000138.5:c.1753G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000576648GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Apr 24, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000576648.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

A variant of uncertain significance has been identified in the FBN1 gene. The G585R variant, arising from the c.1753 G>A nucleotide substitution, has not been published as pathogenic or been reported as benign to our knowledge. This variant is also not observed in large population cohorts (Lek et al., 2016; 1000 Genomes Consortium et al., 2015; Exome Variant Server). The G585R variant is a non-conservative amino acid substitution, which is likely to impact secondary protein structure as these residues differ in polarity, charge, size and/or other properties. Furthermore, this substitution occurs at a position that is conserved across species and in silico analysis predicts this variant is probably damaging to the protein structure/function. The same G585R missense variant arising from a different nucleotide substitution in the FBN1 gene, c.1753 G>C, has been reported in one individual diagnosed with incomplete Marfan syndrome who had a family history suggestive of Marfan syndrome (Khau Van Kien et al., 2010). Additionally, a different missense variant at the same residue in the FBN1 gene (G585E) has been reported in association with Marfan syndrome (Baumgartner et al., 2005). However, no segregation data were reported for either the c.1753 G>C (G585R) or G585E variants, and the clinical significance of these variants remain to be definitively determined. Moreover, G585R does not affect a Cysteine residue within a calcium-binding (cb) EGF-like domain of the FBN1 gene, which is the most common mechanism of pathogenic missense changes associated with FBN1-related disorders (Collod-Beroud et al., 2003).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024