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NM_014874.4(MFN2):c.1078C>G (p.Gln360Glu) AND not provided

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Oct 24, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000486402.1

Allele description [Variation Report for NM_014874.4(MFN2):c.1078C>G (p.Gln360Glu)]

NM_014874.4(MFN2):c.1078C>G (p.Gln360Glu)

Gene:
MFN2:mitofusin 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p36.22
Genomic location:
Preferred name:
NM_014874.4(MFN2):c.1078C>G (p.Gln360Glu)
HGVS:
  • NC_000001.11:g.12002021C>G
  • NG_007945.1:g.26841C>G
  • NM_001127660.2:c.1078C>G
  • NM_014874.4:c.1078C>GMANE SELECT
  • NP_001121132.1:p.Gln360Glu
  • NP_001121132.1:p.Gln360Glu
  • NP_055689.1:p.Gln360Glu
  • NP_055689.1:p.Gln360Glu
  • LRG_255t1:c.1078C>G
  • LRG_255:g.26841C>G
  • LRG_255p1:p.Gln360Glu
  • NC_000001.10:g.12062078C>G
  • NM_001127660.1:c.1078C>G
  • NM_014874.3:c.1078C>G
Protein change:
Q360E
Links:
dbSNP: rs1064795818
NCBI 1000 Genomes Browser:
rs1064795818
Molecular consequence:
  • NM_001127660.2:c.1078C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_014874.4:c.1078C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000571987GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Likely pathogenic
(Oct 24, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000571987.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The Q360E variant in the MFN2 gene has not been reported previously as a pathogenic variant, nor as a benign variant, to our knowledge. The Q360E variant was not observed in approximately 6500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. The Q360E variant is a semi-conservative amino acid substitution, which may impact secondary protein structure as these residues differ in some properties. In addition, this substitution occurs at a position that is conserved across species. However, in silico analysis is inconsistent in its predictions as to whether or not the variant is damaging to the protein structure/function. Missense variants in nearby residues (T356A, T356S, K357N, H361Y, T362M, T362R, R364W, R364P, and R364Q) have been reported in the Human Gene Mutation Database in association with Charcot-Marie-Tooth disease or MFN2-related neuropathy (Stenson et al., 2014), supporting the functional importance of this region of the protein. Therefore, Q360E is a strong candidate for a pathogenic variant, however the possibility it may be a rare benign variant cannot be excluded.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024